Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq2308 123 2e-23 seq8067 102 8e-17 seq294 84.2 2e-11 >seq2308 Length=189564 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||||||||| || || || ||||| || | || ||||| | |||||||| | Sbjct 135512 CCTCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCT 135571 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||||||||||| || || || || |||||||| ||||| |||||||||||||| | Sbjct 135572 TCAGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATG 135631 Query 13802 CTATTAGTCGTTCTCC 13817 ||| || |||||| || Sbjct 135632 CTACTACTCGTTCACC 135647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| |||||||||| | || | |||||||| ||||||||||| ||| Sbjct 133901 GACATCACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCT 133960 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATT 13448 ||||| || ||||| ||||| ||||| |||||||| Sbjct 133961 TCCAGAGAGATATTCTCCATGAAATCAAATGGATT 133995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 13910 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969 |||| ||||||| | | || || |||||||||||||| ||||||||||| || || | Sbjct 137474 CCTT-TCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAA 137532 Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027 ||||||| || || ||||| || ||||| ||||| | ||||||| |||||| || Sbjct 137533 TGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTGACTTGTACTTC 137590 >seq8067 Length=36449 Score = 102 bits (112), Expect = 8e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 13684 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13743 |||||||| ||||||||||| || || || || | |||||||| || |||| || || Sbjct 28360 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTG 28419 Query 13744 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 13802 | |||||||||||| || || | || |||||||| ||||| || || ||||||||||| Sbjct 28420 AGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACGC 28478 >seq294 Length=514361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 131427 TATCTCCGTCTAGGCGAGGAGATTTGGAAATTTTAGGATATTGTATAATAAAATGGTTAG 131486 || |||| || ||||| || || ||||||||||| || |||||||| || ||| | Sbjct 466254 TAGCTCCATCAAGGCGTGGTGACTTGGAAATTTTGGGTTATTGTATGATCTGCTGGCTTA 466195 Query 131487 GTGGTAAATTGCCATGGGAAGATGATTTAAAAAATTGTAAATATGTAATGGAGTCAAAGA 131546 |||||||| |||| ||||||||| || | |||||| | ||||| | |||||||| | Sbjct 466194 GTGGTAAACTGCCTTGGGAAGATAATCTGAAAAATCCAGATTATGTCAAAGAGTCAAAAA 466135 Query 131547 T 131547 | Sbjct 466134 T 466134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478354811953320