Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1203 86.0 3e-12 seq9144 84.2 1e-11 seq609 84.2 1e-11 seq3665 82.4 4e-11 >seq1203 Length=291960 Score = 86.0 bits (94), Expect = 3e-12 Identities = 76/96 (79%), Gaps = 5/96 (5%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAAT-----TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTA 11493 |||| || |||||||| |||||| | |||||||||| ||||||| |||||| Sbjct 37169 TTAAAAAGAAATCAAAACAATGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTA 37228 Query 11494 TTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| ||||||| |||||||||||||| |||| Sbjct 37229 TTAGCACCACGCTCTAACCAACTGAGCTAACCGGCC 37264 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 3102 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 3043 Query 11528 CCG 11530 ||| Sbjct 3042 CCG 3040 >seq9144 Length=24189 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 13005 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 13064 Query 11528 CCGTC 11532 || || Sbjct 13065 CCATC 13069 >seq609 Length=395209 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 32877 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 32818 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 32817 CTGAGCTAACCGGCC 32803 >seq3665 Length=129175 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 117872 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 117813 Query 11528 CC 11529 || Sbjct 117812 CC 117811 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261366549841588