Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq3009 132 7e-26 seq276 122 1e-22 >seq3009 Length=154878 Score = 132 bits (146), Expect = 7e-26 Identities = 180/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 9613 CCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCT 9672 || || | ||| |||| ||||||||||| |||||||| ||| ||||||||| |||||| Sbjct 31309 CCTATCAAGATCAGTCTGGTGGTCTGAAATAGTTGTTCATCATCCCATTCTGGGTGTTCT 31368 Query 9673 CGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATG 9732 | || |||| || || |||| |||||||||| ||||| | || || |||||||| Sbjct 31369 CCCTTAAGAATGTCACAGACTCGATTGTGTTCCCGAAGCCACAATGTGGCATACATCATC 31428 Query 9733 AGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACT 9792 || || || |||| |||||| | || || || |||| | || | || || | Sbjct 31429 AGCCCTGGAACCAAGCCAAAGACTTCCTGTCCTACAGAAAATTTCAGGTGATCAGGGATG 31488 Query 9793 TCGGGAGGATAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCG 9852 | ||| ||||||||||| | |||| ||||| || | || ||||||||||| || Sbjct 31489 TGGGGTGGATAGATCATTTCTGCCTGAGTTTCTTTCACAGTAGGTGGATACATTTCTCCA 31548 Query 9853 TCAATAATCTG 9863 |||| ||||| Sbjct 31549 CCAATCATCTG 31559 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 ||||||||||||||| || ||||| |||||||| || ||| | ||| ||| | || Sbjct 32567 TCTTACCCCATGTCCAAGACCTTTTGTGAAGGCTGGTCCTTTCTGAGTATCTGTCTTGAA 32626 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 | ||||| |||||||| ||| |||| |||| ||||| | || ||||| || ||||| Sbjct 32627 GTATTGGTGAGTGAAATGCTGGGCAAAGAAGGTGAACATGACATTCGTGCCTTGAGGATC 32686 Query 10148 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 10185 ||| |||| | |||| || | | |||||| |||| Sbjct 32687 AGGAATGAATTTTCTCCTTAGCAAAAATTTTTCTACAA 32724 >seq276 Length=528478 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 8741 TTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAG 8800 || |||||| | || || | | ||||| || |||||||| |||||||| | || ||| Sbjct 489050 TTCACGATCTCGAAGCCAGTGGCCCCGCCAAAAGTGCTGGGCTTCCAGTATTCAGGAGAG 489109 Query 8801 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTC 8860 |||||| |||| ||| ||| || || | ||| || ||||| |||| || | ||||| Sbjct 489110 CAGATGGGGTTCCCCAAGAGCCCCTTCAAGGAGAAGGGAGCGCCCATTTCTACCATGCTT 489169 Query 8861 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACA 8920 || || || ||| ||||||| | ||| || ||||||| || | ||| ||||||||| Sbjct 489170 TCTCCAAATATGCCGTTGGGGTAGATCTTCTCTACCAAGAGGCCTGGGTAGAACTCCACA 489229 Query 8921 GCCTCGATGTCTCCGTAAAG 8940 || || |||||||| || || Sbjct 489230 GCATCAATGTCTCCATACAG 489249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708178393368720