Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq6119 114 1e-20 >seq6119 Length=68287 Score = 114 bits (126), Expect = 1e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 111183 AAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACC 111242 ||||||||| || ||||| || ||| |||| ||||| ||||| ||| ||||| ||| || Sbjct 55506 AAAAATGCAGATCTTTGTGAAGACGTTGACAGGCAAGACCATCACCCTGGAAGTGGAGCC 55565 Query 111243 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111302 || || | ||| | |||||| || || |||||||||||| |||| ||| Sbjct 55566 AAGTGACACCATTGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGCATTCCTCCCGA 55625 Query 111303 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111362 ||| || ||||| || | ||| ||||| || |||||||| || | | || || Sbjct 55626 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTA 55685 Query 111363 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 |||||| || || || || || || ||| | || |||||||| | ||||||| Sbjct 55686 TAATATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGCA 55738 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || |||||||| || |||||||||| ||||| || |||| ||| || || Sbjct 55738 ATGCAGATCTTTGTCAAGACACTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCAAGT 55797 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || || || |||||||||||| |||| |||||| Sbjct 55798 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCCGATCAG 55857 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | ||| ||||| || |||| ||| | || | | || || || Sbjct 55858 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCTGACTACAAC 55917 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || || || || || ||| | || |||||||| | ||||||| Sbjct 55918 ATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGCA 55966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422838341194600