Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq7460 178 2e-39 seq6913 172 1e-37 seq6119 143 5e-29 >seq7460 Length=44690 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || |||||||| || |||||||| || ||||| Sbjct 44285 CCACCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 44226 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || || || ||||| || ||| Sbjct 44225 AGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44166 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||||||||| ||| |||||||| || || || Sbjct 44165 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACC 44106 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| ||||||||| || || || | |||||| || || ||||||||| Sbjct 44105 TCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATT 44058 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||| ||| || |||||||| || |||||||| || ||||| Sbjct 44513 CCACCCCGCAGACGCAGGGCCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 44454 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || || || ||||| || ||| Sbjct 44453 AGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44394 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||||||||| ||| |||||||| || || || Sbjct 44393 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACC 44334 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || || | |||||| || || |||||||| Sbjct 44333 TCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44287 Score = 141 bits (156), Expect = 2e-28 Identities = 137/176 (78%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || ||||| || || | |||||||| | |||||| ||||| || || || || || ||| Sbjct 44690 TAGTCGGAAAGCGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGG 44631 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || ||||||||||||||||| || ||||| ||||||||| ||| |||||||| | Sbjct 44630 TCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTT 44571 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||| ||||||||| || || || | |||||| || || |||||||| Sbjct 44570 GGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44515 >seq6913 Length=53205 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 |||| |||| ||| || |||||||| || |||||||| || ||||| || || | ||| Sbjct 52768 CGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCA 52827 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| | |||||| || || || || || || || ||||| || ||||||||||||||| Sbjct 52828 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTG 52887 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || || ||||| ||||||||| ||| |||||||| || || || |||| ||||||| Sbjct 52888 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATG 52947 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || | |||||| || || |||||||| Sbjct 52948 GTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 52982 Score = 140 bits (154), Expect = 6e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||| ||| || |||||||| || |||||| | ||||| Sbjct 52984 CCACCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGCCTTCGTCGGAA 53043 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || |||||||| | |||||| || || || || || || || ||||| || ||| Sbjct 53044 AGCGTGCTGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 53103 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| |||||| || ||| |||||||| || || || Sbjct 53104 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGGCGTTCTCAATGGTGTCGCTTGGCTCCACC 53163 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 ||| ||| |||| || || || | |||||| || || ||| Sbjct 53164 GCCAGGGTAGTGGTCTTCCCAGTCAAGGTCTTCACAAAGATC 53205 >seq6119 Length=68287 Score = 143 bits (158), Expect = 5e-29 Identities = 158/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || ||||| ||||| || || || || | |||||||| | Sbjct 55717 CAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAAAGGGTGCGGCCATCTTCCA 55658 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || || ||||| ||||||||||| ||||| || | Sbjct 55657 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGA 55598 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| || || || ||| |||||||| || || ||||||| ||||||||| || | Sbjct 55597 TCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTCTTGC 55538 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | ||||| || || ||||||||| Sbjct 55537 CTGTCAACGTCTTCACAAAGATCTGCATT 55509 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || |||||||| || |||||||| || || || || || | ||||| || | Sbjct 55945 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCATCCTCCA 55886 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || || || || || || || || ||||| ||||||||||| ||||| || | Sbjct 55885 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGA 55826 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||| || ||| |||||||| || || || |||| |||||||| || | Sbjct 55825 TCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGAGTGATGGTCTTGC 55766 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||||||| || |||||||| Sbjct 55765 CGGTCAGTGTCTTGACAAAGATCTGCAT 55738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921171807288360