Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3601 123 5e-23 >seq3601 Length=132737 Score = 123 bits (136), Expect = 5e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 244326 TGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGC 244385 ||||||| ||||||||||||||||| ||| || |||| | ||||| |||| || | Sbjct 124107 TGCTGACCGGGCTGCCCTCGTAGGTGTCGTACGGCCCGTGTCTTTGGGCGAGCTCGCAAC 124048 Query 244386 TCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGC-GGGCC 244444 | | || ||||| ||||||||||||||||| |||||| || ||| | | || ||||| Sbjct 124047 TGGCCTCCAGGGCCGCGTAGTAGATGGTCTCAAAGATCTGCTGGTTGA-GCAGCTGGGCC 123989 Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504 | | | |||||||| | ||| | |||||| |||| ||||| || ||||| || Sbjct 123988 TCGGGACTCTCGAAGGGGAACCTCATGAGGATGAAGGCGTCAGCCAGACCTTGCACCCCA 123929 Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAG 244534 ||||| ||||| | || ||| |||| ||| Sbjct 123928 ATGCCAATGGGGCGATGGCGCATGTTCGAG 123899 Score = 100 bits (110), Expect = 5e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 245011 CATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGA 245070 ||| ||||| || ||||||||||| || | ||| ||||||| | ||||||||| ||| Sbjct 120257 CATAAAGAGATCTGGGATCCAGAGAGCATAGAAAAGGTCCCGAGCCCTCTGCTCCTCCTT 120198 Query 245071 GCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTA 245130 |||||||| ||| ||| || | ||| |||||||| || | |||||| || |||| ||| Sbjct 120197 CCCAGTGTTTTTCTTCAAGTCGAGAAACTCAAAGACATCAAAGTGCCATGGTTCCAGGTA 120138 Query 245131 GACAGCGAGGGCGCCGGG 245148 || || | ||| || || Sbjct 120137 GATGGCAAAGGCTCCAGG 120120 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 244704 CCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGG 244763 ||||||| ||| | ||||| ||| ||||| |||||||| ||||| || |||||||||| Sbjct 122479 CCACCTCATCCTTGCTGGTGAACTCCACAATTTCGGTGCACAGGTTGCTACACTTGATGG 122420 Query 244764 TGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823 | || |||| ||| |||||| ||| |||||| | ||||| || |||||| | ||| Sbjct 122419 TTCCGAGGTTCTGCTGATTGCTCTTCCGGTTGCAAGAATCCTTATAAAGCATGTACGGCG 122360 Query 244824 CCCCGGTCTC 244833 || ||||| Sbjct 122359 TTCCCGTCTC 122350 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||||||||| || || || || ||||| ||||| ||||||| || ||||| | Sbjct 125538 ACCTGAAACTCCCCAGAGAGAACCCGGCGGGTGTAGATGTTGCTGGTGTAGGGCTCCACA 125479 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 ||| ||||||||| ||||| |||||| || || ||||| || | ||| || || Sbjct 125478 GACTCATTGTTGCCCAAAATCTGAGCCGTGGAAGCTGTTGGCATCGGGGCCACGAGGAGG 125419 Query 244217 CTGTTCCTCACGCCGTGCCT 244236 |||||||| || |||| ||| Sbjct 125418 CTGTTCCTGACCCCGTACCT 125399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943877500760880