Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq6119 127 2e-24 seq7460 104 2e-17 seq6913 100 3e-16 >seq6119 Length=68287 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || || || || || | | |||||| | ||| Sbjct 55721 AGGACAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAAAGGGTGCGGCCATCT 55662 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| |||||| ||||||||||| |||||||| || Sbjct 55661 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCC 55602 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || |||||| ||| | || |||| | |||||||| | || | |||| Sbjct 55601 TGGATCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTC 55542 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| ||||| || || || || || |||||||| Sbjct 55541 TTGCCTGTCAACGTCTTCACAAAGATCTGCATTTT 55507 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || |||||||| || | | |||||| | || Sbjct 55949 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCATCC 55890 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || |||| |||||| ||||||||||| |||||||| || Sbjct 55889 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCC 55830 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || |||| | ||||| || | ||| | |||| Sbjct 55829 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGAGTGATGGTC 55770 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || || || || ||||| Sbjct 55769 TTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 55738 >seq7460 Length=44690 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | ||||| | ||||| ||||||||||| Sbjct 44255 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATCTTCCAGCTGCTTGCCA 44196 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| |||||||| ||||| || || || || || ||| Sbjct 44195 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 44136 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | | ||||| || | || | |||||| || ||||| || Sbjct 44135 ACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTC 44076 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || || |||||||| Sbjct 44075 TTCACAAAGATCTGCATTTT 44056 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | ||||| | ||||| ||||||||||| Sbjct 44483 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATCTTCCAGCTGCTTGCCA 44424 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| |||||||| ||||| || || || || || ||| Sbjct 44423 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 44364 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | | ||||| || | || | |||||| || ||||| || Sbjct 44363 ACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTC 44304 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 44303 TTCACAAAGATCTGCAT 44287 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 64280 GTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATT 64339 ||||| | ||||| ||||||||||||||| | || |||| ||||||||| |||||||| Sbjct 44678 GTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATG 44619 Query 64340 CCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCT 64399 ||||| || || || || || ||| || ||| | || || | | ||||| || Sbjct 44618 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCC 44559 Query 64400 ACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | |||||| || ||||| || || || || || ||||| Sbjct 44558 AGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44515 >seq6913 Length=53205 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| | || || || || | || || || || || |||||||| || | Sbjct 52755 ACCACCCCTCAAACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 52814 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| ||||||||||| ||| | || |||| ||||||||| ||||| Sbjct 52815 AAGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGG 52874 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || ||| | || || | | ||||| Sbjct 52875 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCAC 52934 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || ||||| || || || || || ||||| Sbjct 52935 CTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 52982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499400517411720