Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7460 138 3e-27 seq6913 136 9e-27 seq6119 136 9e-27 >seq7460 Length=44690 Score = 138 bits (152), Expect = 3e-27 Identities = 167/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| |||||||| || |||||||| |||| ||||||||| | | || Sbjct 44279 CGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTG 44220 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| || | ||||||||| ||| ||| ||| Sbjct 44219 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCT 44160 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | |||||| ||| || || |||| Sbjct 44159 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGG 44100 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| ||||| || || | || |||||||| || || |||||| Sbjct 44099 GTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTG---CATTTT 44056 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||| | |||||||| || |||||||| |||| ||||||||| | | || Sbjct 44507 CGCAGACGCAGGGCCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTG 44448 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||||||||| || || ||||| || | ||||||||| ||| ||| ||| Sbjct 44447 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCT 44388 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| || | |||||| ||| || || |||| Sbjct 44387 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGG 44328 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || |||||||| || || Sbjct 44327 GTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTG 44290 Score = 100 bits (110), Expect = 7e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| ||||| ||||| || | ||||||||| ||| ||| ||||| Sbjct 44672 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCC 44613 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| || | |||||| ||| || || |||| ||| Sbjct 44612 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTG 44553 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || | || |||||||| || || Sbjct 44552 ATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTG 44518 >seq6913 Length=53205 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 52770 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATC 52829 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| ||| ||| ||||| || Sbjct 52830 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 52889 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| ||| || || |||| ||||| || Sbjct 52890 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGT 52949 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | || |||||||| || || Sbjct 52950 CTTCCCAGTCAAGGTCTTCACAAAGATCTG 52979 Score = 104 bits (114), Expect = 6e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| |||||||| || |||||||| |||| | | ||| | | || Sbjct 52990 CGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGCCTTCGTCGGAAAGCGTG 53049 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||||||||||||||| || || ||||| || | ||||||||| ||| ||| ||| Sbjct 53050 CTGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCT 53109 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || || | |||||| ||| || || ||| Sbjct 53110 TCCTTGTCCTGGATCTTGGCCTTGGCGTTCTCAATGGTGTCGCTTGGCTCCACCGCCAGG 53169 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 || | ||||| || || | || |||||||| || Sbjct 53170 GTAGTGGTCTTCCCAGTCAAGGTCTTCACAAAGAT 53204 >seq6119 Length=68287 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 55950 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCATC 55891 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || || ||||| || | |||||| || ||| ||| |||||| || Sbjct 55890 CTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTC 55831 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | |||||| ||| || || |||| ||||| || Sbjct 55830 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGAGTGATGGT 55771 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||| || || Sbjct 55770 CTTGCCGGTCAGTGTCTTGACAAAGATCTG 55741 Score = 123 bits (136), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||| ||||| || |||||||| |||| || ||||||| | || | ||||| Sbjct 55722 CAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAAAGGGTGCGGCCATC 55663 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || ||| ||| |||||| || Sbjct 55662 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTC 55603 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| || || || | |||||| ||| || || |||| ||||| || Sbjct 55602 CTGGATCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGT 55543 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||| || || | || |||||||| || || |||||| Sbjct 55542 CTTGCCTGTCAACGTCTTCACAAAGATCTG---CATTTT 55507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178330800755571