Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2943 279 2e-69 seq2798 95.1 5e-14 seq6372 87.8 7e-12 seq1832 84.2 9e-11 >seq2943 Length=159892 Score = 279 bits (308), Expect = 2e-69 Identities = 1053/1614 (65%), Gaps = 71/1614 (4%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || || || ||||| | || ||||| | || || || || |||| ||| | || || Sbjct 60110 GCCATAGGCATTGACTTGGGCACCACATACTCCTGCGTCGGAGTTTTCCAGCACGGGAAG 60051 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || || || || || ||||||||| || |||||||| | || |||||| Sbjct 60050 GTGGAGATCATTGCCAACGACCAAGGAAACCGCACTACTCCGAGCTATGTTGCCTTTACG 59991 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAA 451091 ||| | ||| | || | || | || || || ||||| | || ||| |||| | Sbjct 59990 GATACTGAACGCCTCATCGGAGATGCAGCCAAGAATCAAGTGGCCATG--AATCCCAACA 59933 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| | | |||||| || ||| | |||||||| | | |||||| ||| || || Sbjct 59932 ACACCATCTTTGATGCCAAGCGTCTCATTGGCCGCAAATTCGATGATCCTACGGTGCAGT 59873 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 || | || || ||| | ||| || | | || || ||||| | | |||| Sbjct 59872 CCGATATGAAGCACTGGCCTTTTCGTGTGGTGAGTGAAGCTGGGAAGCCAAAGGTACAAG 59813 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | || || | ||| || ||||| ||||||||||||||| || ||||| | | Sbjct 59812 TTGAGTACAAGGCTGAGGTCAAGACTTTCTTTCCTGAAGAAATTTCCTCGATGGTGTTGA 59753 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGA-TGCAGTAATT 451330 | |||||||| |||| ||| || ||| | |||| ||| | || ||| ||||| Sbjct 59752 CCAAAATGAAGGAAATAGCTGAGGCATACCTGGGTTGCAAAGTC-CAGAGTGCTGTAATC 59694 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| || || || |||||||| | ||||| ||||| || |||||||||||| || Sbjct 59693 ACTGTACCTGCATACTTCAATGACTCCCAACGCCAAGCCACCAAAGATGCAGGAACCATC 59634 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 | ||| | ||||| || || || |||||||| || ||||| ||||| | || ||||| Sbjct 59633 ACAGGTCTCAATGTACTGCGCATCATTAATGAGCCCACAGCTGCTGCCATTGCCTATGG- 59575 Query 451451 CTAGGAAAATCAAAAGA----AACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 | ||| || || || | ||| || || ||| | | | ||||| || ||||| Sbjct 59574 TTTGGATAAAAAAGGGAGCAGAGCAGGTGAGAAGAATGTGCTGATCTTTGACTTGGGTGG 59515 Query 451507 AGGAACTCATGATACTTCTGTACTTT--CAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || ||| |||| ||| | ||| | ||||||||||| | |||||||| || | Sbjct 59514 TGGCACTTTTGAT--GTCTCCATTTTGACCATTGAAGATGGCATCTTTGAAGTGAAATCT 59457 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTG-GAATGGTT 451623 || ||| |||||||| | || ||||| || |||| ||| || ||| | || Sbjct 59456 ACTGCTGGAGATACTCACTTGGGTGGTGAGGACTTTGACAATCGTATGGTGAGTCACTTT 59397 Query 451624 GAAAACTGATGTTCAA-CGAAAAC-TAAAAGTAGATATTTCTACTAACCAAAAAGCACTT 451681 | | | ||||| || || | ||| || || ||| || ||| | |||| || Sbjct 59396 GTGGA--GGAATTCAAGCGCAAGCATAAGCGT-GACATTGCTGGCAACAAGCGAGCAGTT 59340 Query 451682 AGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGT---TCAACACAAACT 451738 || || || ||| | || | ||| ||| ||| || ||| || || ||| || Sbjct 59339 AGGCGGCTCCGCACAGCCTGTGAGAGAGCCAAACGTACCCTGAGTTCCTCCACCCAAGCT 59280 Query 451739 ACTAGTATAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTC--TTACCC 451796 | ||| | ||||| ||| |||||||||| ||| | |||| || | |||| Sbjct 59279 TC---TATTGAGATTGACTCATTATTTGATGGAATTGAT--TTCTACACATCCATCACCC 59225 Query 451797 GTGCTAAATTTGAA----TCAAT-TTGTTCCAGTATTTTTGCACGGGTA--ATGAAACCT 451849 ||||| |||||| ||||| || || | || | | |||| | ||||| Sbjct 59224 GTGCTCGCTTTGAAGAGCTCAATGCTGATC------TCTTCCGC-GGTACTCTTGAACCT 59172 Query 451850 GTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTT 451909 || || | | | | |||| |||| | |||| | || |||||||||| || Sbjct 59171 GTGGAGAAGGCTCTTCGTGATGCTAAGCTGGACAAAGGGCAGATCAATGAAATTGTTCTA 59112 Query 451910 GTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTCTTCTTATTTTGG 451965 || || || || || || || || || || ||| | || | | |||| ||| Sbjct 59111 GTCGGTGGCTCAACTCGTATCCCCAAGATCCAAAAGTTGCTACAAGACTTC----TTTAA 59056 Query 451966 AGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGT 452025 |||||| | || || ||| ||||||||||||||||||| |||||||||||||| || Sbjct 59055 TGGAAAAGAGCTGAACAAAAGCATAAATCCTGATGAAGCTGTGGCATATGGTGCTGCTGT 58996 Query 452026 TCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAG 452084 || || |||||||| | ||| || || | ||||| | ||| | ||| | | | Sbjct 58995 GCAGGCTGCTATTCTGATGGGTGACAAATCA-GAAAATGTGCAAGACCTCCTGCTGCTTG 58937 Query 452085 ATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTA 452144 ||||| |||| || ||||| || |||| || |||||||| | |||||| ||||| | Sbjct 58936 ATGTAGCACCACTTTCTCTGGGTATTGAGACTGCTGGTGGTGTAATGACTGCCTTAATCA 58877 Query 452145 AACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACC 452204 | || || ||||||| || | | || || || | || | | | | | | Sbjct 58876 AGCGTAACACAACTATTCCCACCAAGCAAACCCAGACCTTCA--CCACCTATTCAGA--C 58821 Query 452205 AACCAG----GTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAAT 452260 |||||| |||| | ||||||| ||| || || || || ||||| || || Sbjct 58820 AACCAGAGTAGTGTGCTGGTGCAAGTGTATGAGGGTGAGCGGGCCATGACTAAGGACAAC 58761 Query 452261 AATAAACTAGGAGAATTT-ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCA 452319 ||| || || ||||| ||| | | || || ||| || | || || || Sbjct 58760 AATCTGCTGGGCAAATTTGACT-TGACGGGTATCCCACCTGCACCTCGTGGTGTGCCCCA 58702 Query 452320 AATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGA-AA 452378 |||||| |||| | ||| |||||||||||||||| || ||||| | |||||| || || Sbjct 58701 AATTGAGGTTACATTTGACATTGATGCAAATGGTATCCTCAATGTCACTGCAGTGGACAA 58642 Query 452379 AATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGT-TTATCTAA 452436 | || | |||||| |||| || ||||||||||| ||||| ||| |||| ||| | || Sbjct 58641 GAGCA-CAGGAAAA-GAGAACAAGATTACAATTACAAATGACAAAGGCCGTCTTAGC-AA 58585 Query 452437 AGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 ||| || ||||| ||||| | |||||||| | ||||| || ||||| Sbjct 58584 AGATGACATTGACCGCATGGTGCAAGAAGCAGAGCGTTACAAGGCAGAGGATGA 58531 >seq2798 Length=165204 Score = 95.1 bits (104), Expect = 5e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 451311 CAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAA 451370 || |||| ||||||| || || || || || ||||||||||| | || ||||| || | Sbjct 11302 CAATTACCAATGCAGTTATCACAGTCCCAGCCTATTTCAATGACTCTCAGCGGCAGGCTA 11361 Query 451371 CTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAG 451430 | |||||||| || ||||| || | ||||||||||| || || |||||||| |||| Sbjct 11362 CCAAAGATGCTGGCACCATTGCAGGCCTCAATGTTCTTCGCATCATCAATGAACCCACAG 11421 Query 451431 CAGCTGC 451437 |||| || Sbjct 11422 CAGCAGC 11428 >seq6372 Length=64886 Score = 87.8 bits (96), Expect = 7e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||||||||| ||||| |||||||| || |||||| | || |||||||||| || Sbjct 434 GCCACTAAAGATGCTGGACAGATTGCTGGGTTGAATGTTTTGAGAGTTATTAATGAGCCA 375 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAG 451454 ||||| || || ||||| |||||| ||| Sbjct 374 ACAGCTGCAGCCCTAGCTTATGGATTAG 347 >seq1832 Length=224391 Score = 84.2 bits (92), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 391151 AGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAG 391210 ||||||||||||||| ||||| ||||||||||| | || |||||| | || |||||| | Sbjct 202734 AGGAATTCCTCCTGACCAACAGCGTTTAATTTTTGCTGGCAAACAATTGGAGGATGGACG 202793 Query 391211 AACTTTGGCGGATTATAATATTGATAAGG 391239 ||| || | |||||||| ||| | |||| Sbjct 202794 TACTCTGTCTGATTATAACATTCAAAAGG 202822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974728297742204