Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2308 134 2e-26 seq8067 116 4e-21 >seq2308 Length=189564 Score = 134 bits (148), Expect = 2e-26 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||||||||| |||| ||||||||||| || | || ||||||| |||| ||| || Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||||||||||| ||||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 135633 Query 37320 AC 37321 || Sbjct 135634 AC 135635 Score = 104 bits (114), Expect = 3e-17 Identities = 83/100 (83%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 37429 TTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATAT 37488 |||||| | |||| |||||||||||||||| ||||||||||||||||| || ||||| | Sbjct 137476 TTTCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 137535 Query 37489 TTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528 |||| || || ||||| || ||||| ||||| | ||||| Sbjct 137536 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTC 137575 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 36820 TCATTT--TTTAAAAATCTTCATCTAACGTAAATT--TTATTTCCTTATTACTATTCATA 36875 |||||| |||| |||||| |||| || || ||| |||| | | | || ||| Sbjct 133849 TCATTTCTTTTAGAAATCTGCATCCAAAGTGAATGAGTTATCTGC--AGGGCTTGACATC 133906 Query 36876 ACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGT 36935 || ||||| ||||||||||||| || || |||| || || || || || ||||| || Sbjct 133907 ACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCTTCCAGA 133966 Query 36936 GATATATTTTCCATAAAATCAAATGGATT 36964 || ||||| ||||| |||||||||||||| Sbjct 133967 GAGATATTCTCCATGAAATCAAATGGATT 133995 >seq8067 Length=36449 Score = 116 bits (128), Expect = 4e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| || || || | ||||||||||| ||||| || | Sbjct 28358 CTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 28417 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | |||||||||||||||||||| ||||||||||| || ||||| || || ||||| | Sbjct 28418 TGAGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACG 28477 Query 37318 CTAC 37321 | || Sbjct 28478 CAAC 28481 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || ||||| || ||||| ||||||||||| || ||||||| |||||| || || Sbjct 30503 ATCTTTGATGTAAGTGTCTATTAGCAAACTATACATCTCGGAGTGAACATTTTCTATTGC 30562 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTC 37528 |||||| || ||||| ||||| | |||||| Sbjct 30563 TATCTGGAAGCCATAGAAACAGCGAGCTTC 30592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592027208912520