Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq60 141 2e-28 seq18085 127 4e-24 seq3601 122 2e-22 >seq60 Length=762048 Score = 141 bits (156), Expect = 2e-28 Identities = 177/241 (73%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCC 241448 |||| ||||| | | || ||| || || | ||| || | || || ||||| |||| Sbjct 527467 GCTGGCAGCCGTTGTTCACGTGGTTCATTACTTTCTGCTTCAACTGTGCTACCTGATCCC 527408 Query 241449 GCAGAACGGAC--GCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTT 241506 | || || || || || || |||||||| ||||| || ||| | |||||| || Sbjct 527407 GGAG--CGCACTGGCAGTGTTAGACAGTCCCGCGTTCTCGTTCTTTAAGCTCTTCACCTT 527350 Query 241507 CTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCG 241566 |||||||||||| |||||||| ||||| || | | | |||||||||||| |||| ||| Sbjct 527349 CTCCTCCAGCCGAGCGATGCGCTCCAGCTTCCTCTTCCTGCATTTGGTGGCAGCCAGGCG 527290 Query 241567 GTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 ||| || || | ||| | ||| |||||||||| |||||||| ||||||| || ||||| Sbjct 527289 GTTGCGCAGCCGCTTCCTCTCCACCTTGATGCGCTCCTGGTCTTCCATGTTAATAGGAGA 527230 Query 241627 C 241627 | Sbjct 527229 C 527229 >seq18085 Length=277 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || || | ||| ||||| || |||||||| ||||| || | | || || || ||| Sbjct 54 AGCACTTTCTGCTTGAGCTGCGCCACCTGCTCCCGGAGGAGGTTGGCCGTCGAGGCCAGC 113 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| ||| |||||||||||||| || | |||||| ||||| Sbjct 114 TCGGTGTTCTGGCTCTTGAGGCTCTTGACTTTCTCCTCCAGGCGGGAGATGCGCTCCAGC 173 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || ||||| ||||| |||| ||| || | |||||| || || | ||| || || |||||| Sbjct 174 TTCCGCCGCCGGCACTTGGAGGCCGCGATGCGGTTGCGCAGCCGCTTGCGCTCTGCCTTG 233 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 234 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 266 >seq3601 Length=132737 Score = 122 bits (134), Expect = 2e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCC-AGCTC 213199 ||| |||| || |||||||||| ||| | | ||| || || || || |||| | ||||| Sbjct 124111 CCTCTGCTGACCGGGCTGCCCTCGTAGGTGTCGTACGGCCCGTG-TCTTTGGGCGAGCTC 124053 Query 213200 GCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 ||| |||| |||||| |||||||||||||| ||||| |||| | ||||||| || Sbjct 124052 GCAACTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCAAAGATCTGCTGGTTGAGCAGCTG 123993 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 |||||| || | |||||| | | ||||| | ||| | |||||||| || || || Sbjct 123992 GGCCTCGGGACTCTCGAAGGGGAACCTCATGAGGATGAAGGCGTCAGCCAGACCTTGCAC 123933 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT 213355 ||| ||||| ||||| | || | || ||| || || Sbjct 123932 CCCAATGCCAATGGGGCGATGGCGCATGTTCGAGTT 123897 Score = 93.3 bits (102), Expect = 8e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 |||||| |||||||||||||| ||||| | ||| ||| || ||||| | | ||| Sbjct 127112 GTTCAGAGACTGACTCTGGTCAATGAAAGCCCCCCGGTCGGCCGCCATCTTCAGGATGGT 127053 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGC-CGG 212814 | |||| |||| |||||||||||||||| ||| | || | |||||| ||||| | | | Sbjct 127052 TTTCTGCGAGATCTCCCACACGGTCTTGTAGAGCTGCTTCAAGTCCTC-GGGAATCTCCG 126994 Query 212815 GGATGTTCTG 212824 |||||||||| Sbjct 126993 GGATGTTCTG 126984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931077361969920