Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2943 170 1e-36 seq1444 109 4e-18 seq3310 95.1 8e-14 >seq2943 Length=159892 Score = 170 bits (188), Expect = 1e-36 Identities = 531/815 (65%), Gaps = 18/815 (2%) Strand=Plus/Minus Query 475367 ACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTA--TCATGGT 475424 || ||||||||| | || | |||||||| || ||||| ||| | | || ||| | Sbjct 59456 ACTGCTGGAGATACTCACTTGGGTGGTGAGGACTTTGACAATCGTATGGTGAGTCACTTT 59397 Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTC----AACATCTGCTAAAGCA 475480 ||| || || |||||| | || |||| ||| || | |||| | |||| Sbjct 59396 GTG--GAGGAATTCAAGCGCAAGCATAAGCGTGACATTGCTGGCAACAAGCG----AGCA 59343 Query 475481 TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAA 475540 | || || || | || || ||||| | || || || | || ||| | || ||| Sbjct 59342 GTTAGGCGGCTCCGCACAGCCTGTGAGAGAGCCAAACGTACCCTGAGTTCCTCCACCCAA 59283 Query 475541 ACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGG 475600 || || |||| |||| || | ||||| |||||||||| | || || || | Sbjct 59282 GCTTCTATTGAGATTGACTCATTATTTGATGGAATTGATTTCTACACATCCATCACCCGT 59223 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||| |||||||| | | |||||||||| | || ||||||| || || | Sbjct 59222 GCTCGCTTTGAAGAGCTCAATGCTGATCTCTTCCGCGGTACTCTTGAACCTGTGGAGAAG 59163 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 | ||| | ||| |||| || |||||| || || ||||||||||||| || || || Sbjct 59162 GCTCTTCGTGATGCTAAGCTGGACAAAGGGCAGATCAATGAAATTGTTCTAGTCGGTGGC 59103 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTA 475780 ||||| | || || || || | | |||| | | |||||||| ||| || | Sbjct 59102 TCAACTCGTATCCCCAAGATCCAAAAGTTGCTACAAGACTTCTTTAATGGAAAAGAGCTG 59043 Query 475781 AATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT 475840 || |||| ||||||||||||||||||| |||||||| |||||||| || || |||||| Sbjct 59042 AACAAAAGCATAAATCCTGATGAAGCTGTGGCATATGGTGCTGCTGTGCAGGCTGCTATT 58983 Query 475841 TTATCAGGTCAATCAGACGAGAAACTAAATAATA--TTGTACTTGTTGACGTAACTCCAC 475898 | ||| | || | ||||| | || | | | || |||| ||| | |||| Sbjct 58982 CTGATGGGTGA--CAAATCAGAAAATGTGCAAGACCTCCTGCTGCTTGATGTAGCACCAC 58925 Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958 |||| | ||| |||| || | ||| || | |||||| | || | | || || Sbjct 58924 TTTCTCTGGGTATTGAGACTGCTGGTGGTGTAATGACTGCCTTAATCAAGCGTAACACAA 58865 Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018 |||| || ||| || | | || |||| ||||| || || || | | ||| Sbjct 58864 CTATTCCCACCAAGCAAACCCAGACCTTCACCACCTATTCAGACAACCAGAGTAGTGTGC 58805 Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTT 476078 | ||| | | ||| ||||| | | ||||| || || || || || | | Sbjct 58804 TGGTGCAAGTGTATGAGGGTGAGCGGGCCATGACTAAGGACAACAATCTGCTGGGCAAAT 58745 Query 476079 TTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137 || | ||||| ||||| || ||||| || | || || || |||||||| ||||| ||| Sbjct 58744 TTGA-CTTGACGGGTATCCCACCTGCACCTCGTGGTGTGCCCCAAATTGAGGTTACATTT 58686 Query 476138 GATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 || ||||||||||||||||| || ||||| ||||| Sbjct 58685 GACATTGATGCAAATGGTATCCTCAATGTCACTGC 58651 >seq1444 Length=261962 Score = 109 bits (120), Expect = 4e-18 Identities = 141/195 (72%), Gaps = 11/195 (6%) Strand=Plus/Minus Query 80357 ACAAGTATCATAGAATTTGATATATATCCAAAATTATCATATTGTTTAGCAGCACAAGAT 80416 ||||||| |||||| || | | | |||| | || | |||||| |||||| | ||| Sbjct 62922 ACAAGTAGCATAGAGTTAGTGACTTGTCCATACAATTCCTGTTGTTTCGCAGCATAGGAT 62863 Query 80417 AAATTTATCAAATTCCAAGCTATAATACCCGGTCTTCCATTAAAAAATAATTTTAAATCA 80476 ||||| |||||| |||| ||||| ||||| |||| | ||| ||||||||||| |||||| Sbjct 62862 AAATTAATCAAAGTCCATGCTATTATACCAGGTCGGCAATTGAAAAATAATTTGAAATCA 62803 Query 80477 -------GTTCCAAGAATTTGTGGATTAAATTCAATTCCCATTACAATATCATaaaaaaa 80529 | ||||| ||||||||| |||||||||||| | | ||||| || || Sbjct 62802 AACCATTTTCCCAAG----CGTGGATTAAGTTCAATTCCCATCATGAAGTCATAGAAGAA 62747 Query 80530 TTTACCAGTACATTT 80544 || ||||| |||| Sbjct 62746 ATTGCCAGTGAATTT 62732 >seq3310 Length=142830 Score = 95.1 bits (104), Expect = 8e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 || |||||||| ||||| || || || |||||||||||||| || |||||||||||||| Sbjct 36103 GGCATTCCTCCAGCTCCAAGGGGTGTGCCTCAAATTGAAGTAACCTTTGATATTGATGCC 36044 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| || || ||||| ||||| |||||| Sbjct 36043 AATGGCATCCTCAATGTGTCTGCTGTTGATAA 36012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266501453653724