Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq4806 181 1e-40 >seq4806 Length=94900 Score = 181 bits (200), Expect = 1e-40 Identities = 482/734 (66%), Gaps = 7/734 (1%) Strand=Plus/Minus Query 160055 ATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAA 160114 ||| || |||| |||||| || || || ||||| ||| | || || || || || || Sbjct 48080 ATGCTCCTCCAAACATTGAACTGCAAAAGGGTCAATGTCATTATCAAACTTGTTGGCAAA 48021 Query 160115 CAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGA 160174 | ||| || ||||||| |||||| || |||||| || || || || | || Sbjct 48020 GAAATGATGT---TTCTGTAACATCCAGCTCAAGTCTCCAACTCCAAAGACACATATAGA 47964 Query 160175 ACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTA 160234 || | ||| || || || || || || || | || || || | ||| || || || | Sbjct 47963 GCGGACGTGGACTCCATTACAGGGGGGATAAGGGGCACCCTTGGACACATCCCCCTCAAA 47904 Query 160235 GTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACAT 160294 ||| |||||||||||||||| ||| || || | ||| || || |||||||||| | Sbjct 47903 GTAATGCCACTTCACAAACCGGGCAATTGCATTCATATCAGAAACATCGTATTTGTCACT 47844 Query 160295 --CAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCG 160352 ||||| || ||||| ||||| | || || ||||| | || ||||| | | ||| Sbjct 47843 GGCAGGG--ACTGCACCAGGAACCTCAGGGATTCGCTGAATTGTTGCCCATAAGAATTCA 47786 Query 160353 TCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAGA 160412 || || ||||||||||| |||| ||| ||||| || | ||| |||| | | Sbjct 47785 TCAGGACTGTACGTGTCTTTAGCCCACTCCATAAAAGCAAGAATTTTTCTGTTCTCTAAT 47726 Query 160413 ACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATG 160472 || | || | ||| | || ||||| || || ||||| ||||| || ||| | Sbjct 47725 ACATATTCCACAAACCTCCTGCTGACAACAAAATAGGCACTGCCAGAGAAAATGGGTGTA 47666 Query 160473 GGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGCG 160532 | ||| || | ||| || || | || | | || | |||| || Sbjct 47665 TTGAGAGGTGGATGCTGTTTATCTATTCCCATATTTTTTAACTTGCCATCAACCACTTCG 47606 Query 160533 TGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTTG 160592 || | |||||||||| ||| ||||| | ||||| ||| || |||| ||| || Sbjct 47605 TGATGTTTCTTCCACCGCACCTCCTTGTTTGAAGGCATTTTTTCAGTTTCTAAACTATTT 47546 Query 160593 GCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCG 160652 |||| | ||| | ||||| || || || ||| |||| ||||||| || || || Sbjct 47545 TCACCCTTGAGGGCTTTCAAACTCTCCACTATTTCTTGGTTGGTCTTGATGGGGAAATCC 47486 Query 160653 GTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATG 160712 | || || | ||| |||| ||| ||||| || ||||| || || ||| |||| Sbjct 47485 ATGCCACAGAGGTTGATCAAGTATTTCCAGCTCACGCTCCTCCTGTAGAGATCCTTCATA 47426 Query 160713 CAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTG 160772 || || | || || ||||| | ||||||||| || |||||||| |||| |||| ||| Sbjct 47425 CAGTTGAGGTCAGCTTGCACCCTGCTCCAGGATGCATACACTACACTCTCCAGTTGGCTG 47366 Query 160773 GCCACAAAGACGTT 160786 || | ||||| || Sbjct 47365 GCAATGAAGACATT 47352 Score = 84.2 bits (92), Expect = 3e-11 Identities = 205/311 (66%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 160722 TCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAG 160781 || || ||||| | ||||||||| || |||||||| |||| |||| ||||| | ||| Sbjct 47278 TCAGCTTGCACCCTGCTCCAGGATGCATACACTACACTCTCCAGTTGGCTGGCAATGAAG 47219 Query 160782 ACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTT 160841 || || | ||||| || | ||||| || || ||||| || | |||| Sbjct 47218 ACATTGTGAAAACATGATGCAATTCCTTTTACAGCTGTCAAGAAAGACTCTGGGGACTTT 47159 Query 160842 CGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCG 160901 ||| || || | ||| || ||||||||| || || |||| || || | |||||| Sbjct 47158 TTGTCAACATGAATGCAGTAATAGTTCTGAGGAGCATATATGGTTCTCAGAAGCCTCTCA 47099 Query 160902 AACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCG 160961 | ||| || ||||||| | ||| || || || || || ||||| || | || || Sbjct 47098 AGCATACTAATTTTATGATAAACCACTATTGAATATGCAATGGGAAATTCTGCTTCTTCT 47039 Query 160962 CGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCACAATCCCGCGTC 161021 || || | | | | || || ||| ||| ||||| | ||||||| ||| Sbjct 47038 TTGCTAAGAGGTTCCATAATATATTTCCGCCCCTTAATAAAGGAGGCACAATCAACTGTC 46979 Query 161022 ATGTTGATATA 161032 ||||||||||| Sbjct 46978 ATGTTGATATA 46968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576936990317880