Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq6119 114 3e-20 seq8067 95.1 2e-14 seq1832 86.0 1e-11 >seq6119 Length=68287 Score = 114 bits (126), Expect = 3e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | || | ||| | || | ||| || ||||||||| ||| Sbjct 55739 ATGCCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCA 55680 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || ||||||||||| | ||||| ||||| || Sbjct 55679 GAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGA 55620 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || || ||| ||||||||| || | || | || Sbjct 55619 GGAATGCCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCC 55560 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || || ||||| || || || || || || | ||| ||||||||||| Sbjct 55559 ACTTCCAGGGTGATGGTCTTGCCTGTCAACGTCTTCACAAAGATCTGCATTTT 55507 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365 ||| |||||||| ||||| | || | ||| | || | ||| || ||| || || || Sbjct 55968 AATGCCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 55909 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| | || || |||| |||| || || ||||||||||| | ||||| ||||| || Sbjct 55908 AGAAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 55849 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || |||||||| || || || || || ||||| || | || | || Sbjct 55848 AGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTC 55789 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| || || || | ||| || | ||| |||||||| Sbjct 55788 CACCTCCAGAGTGATGGTCTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 55738 >seq8067 Length=36449 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 49860 ATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATT 49919 |||| |||||| ||||| | ||||||||||| |||||||| || |||||||||||| Sbjct 28372 ATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCTTGAGCCAAAATATT 28431 Query 49920 GATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGC 49966 | ||||||| || ||||||||| || || |||||| ||||| || Sbjct 28432 GCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACGC 28478 >seq1832 Length=224391 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/89 (82%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || ||||||||||| | || ||| |||| ||||||||||| |||||||| | Sbjct 202821 CTTTTGA-ATGTTATAATCAGACAGAGTACGTCCATCCTCCAATTGTTTGCCAGCAAAAA 202763 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCT 192435 |||| | |||||| ||||| || |||||| Sbjct 202762 TTAAACGCTGTTGGTCAGGAGGAATTCCT 202734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983986642307550