Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1203 246 5e-59 seq5777 224 2e-52 seq930 206 4e-47 seq9144 187 4e-41 seq2189 87.8 3e-11 >seq1203 Length=291960 Score = 246 bits (272), Expect = 5e-59 Identities = 201/244 (82%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 79082 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 79141 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||| |||||||| | ||| ||| ||||||||| | Sbjct 79142 GCAGCAGGCGCACGGCCGTCTGGACCTCGCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 79201 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||||| ||||||| |||| ||||||||||| || ||||||| Sbjct 79202 GCGCCAGGCGGGAGGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 79261 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 79262 TGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 79321 Query 1485710 AAAC 1485713 | || Sbjct 79322 AGAC 79325 Score = 93.3 bits (102), Expect = 7e-13 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||| | ||||||| |||| ||| |||||| || ||| ||| Sbjct 13292 GCGCCAGGCGGGAGGCCTCTCCGGCGATGCGCTCGAAGATGGCGTTGAAGAAGGAGGTCA 13233 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| | | | ||| ||||||| | |||||||||||||||||| |||||||||| Sbjct 13232 TGATGCTCTTGGCCTTGGAGGAGATGGCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 13173 Query 1485710 AAAC 1485713 | || Sbjct 13172 AGAC 13169 Score = 86.0 bits (94), Expect = 1e-10 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 13870 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 13811 Score = 86.0 bits (94), Expect = 1e-10 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| ||| Sbjct 74902 TGTACTTGGTGACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCTCGCCGGGCA 74843 >seq5777 Length=73217 Score = 224 bits (248), Expect = 2e-52 Identities = 196/244 (80%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||| | |||||||||||| |||||| ||| || ||| Sbjct 11594 TGTACTTGGTGACGGCCTTGGTGCCCCCCGAGACGGCGTGCTGGGCCAGCTCGGCGGGCA 11535 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| |||||||||||||||| | ||| ||| ||||||||| | Sbjct 11534 GCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 11475 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||| | ||||||| ||| ||||||||||| || | ||||| Sbjct 11474 GCGCCAGGCGGGAGGCCTCTCCGGCGATGCGCTCGGAGATGTCGTTGACGAAGGGGTTCA 11415 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 11414 TGATTCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 11355 Query 1485710 AAAC 1485713 | || Sbjct 11354 AGAC 11351 >seq930 Length=319869 Score = 206 bits (228), Expect = 4e-47 Identities = 192/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || || ||||||||| ||||||| || ||| ||| Sbjct 87935 TGTACTTGGTGACAGCCTTGGTGCCTTCGGACACGGCGTGCTTGGCCAGCTCCCCGGGCA 87876 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||| ||||||||||| |||| | ||| || ||||||||| | Sbjct 87875 GCAGGAGGCGCACGGCCGTCTGGATCTCCCGGGAGGTGATGGTCGAGCGCTTGTTGTAGT 87816 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| |||||| | ||||||| |||| |||||||| || || ||||||| Sbjct 87815 GGGCCAGGCGGGACGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCA 87756 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||||| ||||||||| |||||||| |||||||||| Sbjct 87755 TGATGCTCATGGCTTTGGACGAGATGCCCGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 87696 Query 1485710 AAAC 1485713 | || Sbjct 87695 ACAC 87692 >seq9144 Length=24189 Score = 187 bits (206), Expect = 4e-41 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| ||||| |||||||||||| ||||||| ||||| ||| Sbjct 11703 TGTACTTGGTCACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCCAGCGCGCCGGGCA 11644 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 |||||| |||| ||||||||| ||||| | ||| ||| ||||||||| | Sbjct 11643 GCCGGAGGCGCGCGGCCGTCTGGATCGGGCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 11584 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||||| ||||||| |||| ||||||||||| || ||| | | Sbjct 11583 GCGCCAGGCGGGAGGCCTCGGCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGGTTA 11524 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCT 1485697 |||| ||| | ||| ||||||||| ||||||| ||||||||| Sbjct 11523 TGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGGGCACCTGCT 11476 >seq2189 Length=213088 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 434126 CGTGATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 434185 ||| ||||||||||| ||| | ||||||||| | |||||||| || ||| | ||||| Sbjct 51668 CGTCATCTCCTTTGATGGCTCGTACGTCAACTATCGCCACTTGGCCCTGCTCTGTGACAC 51609 Query 434186 CATGTGCTGTCGCGGCTCGGTGGTGGCCGTCACGCGGCACGGCTTCAACCG 434236 |||| ||| ||||| || ||||| |||||||||| ||| ||||||| Sbjct 51608 CATGACCTGCCGCGGGCATTTGATGGCCATCACGCGGCATGGCGTCAACCG 51558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912085771795607