Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq5783 150 3e-31 >seq5783 Length=75334 Score = 150 bits (166), Expect = 3e-31 Identities = 136/171 (80%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428 |||||| |||| |||||||||||||| ||||| |||||||| || || | || ||||| Sbjct 48204 GATAGCAGGAGCGTTATGGTGGTACTACATATCAAAAGGGATTGAGTATCTGGACACAGT 48145 Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488 ||| ||||| || || || || |||||||| | || ||||| || || ||||| ||||| Sbjct 48144 GTTCTTCATCCTAAGAAAGAAATTTAATCAAATCAGTTTTCTTCATGTCTATCACCATTT 48085 Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 |||||||||||||| | ||| | || || |||||| |||||||||| || Sbjct 48084 CACTATGTTTACTTTGTGGTGGATTGGCATAAAATGGGTTGCAGGAGGACA 48034 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 58673 CAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTTTCCA 58732 || |||||| | |||| || || ||||| |||| |||||||| |||||||| ||||| Sbjct 44745 CAGTTCCATGTGACTATTGGCCACACCGCCCTGTCTATTTACATTGATTGCCCCTTTCCT 44686 Query 58733 AAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGGTAAC 58792 ||||||| ||| ||| || || ||||| | | ||||| || || ||||||||||| Sbjct 44685 AAATGGATGCACTGGGGTGTCATTGTCTATGCCACCACTTTCATTTTTCTGTTTGGTAAC 44626 Query 58793 TTCTATTTTAGAACATACAAGA 58814 ||||| | | | |||||||||| Sbjct 44625 TTCTACTATCGGACATACAAGA 44604 Score = 89.7 bits (98), Expect = 9e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 |||||||| || ||||| ||||| |||| || |||||| ||||||||| || ||||| Sbjct 46586 GCATTTTTTGGAGCTCATATGAATGCTTTCATTCATGTTGTTATGTATATGTACTATGGA 46527 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || ||||| | | || | ||||| | ||||||||||| || | || ||| Sbjct 46526 CTAGCTGCCTGTGGCCCAAAATTCCACAAGTACCTTTGGTGGAAGCGATATTTGACCATA 46467 Query 58661 ATGCAATTGGTA 58672 |||||||| ||| Sbjct 46466 ATGCAATTAGTA 46455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902969510971680