Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7460 136 4e-27 seq6913 136 4e-27 seq6119 134 1e-26 >seq7460 Length=44690 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | |||| | | | || || |||||||||| Sbjct 44256 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCA-TCTTCCAGCTGCTTGC 44198 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| |||||||||||||| |||||| || Sbjct 44197 CAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 44138 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| | |||||||| || | ||||| ||| || || |||| | Sbjct 44137 TGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGG 44078 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 44077 TCTTCACAAAGATCTGCAT 44059 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | |||| | | | || || |||||||||| Sbjct 44484 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCA-TCTTCCAGCTGCTTGC 44426 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| |||||||||||||| |||||| || Sbjct 44425 CAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 44366 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| | |||||||| || | ||||| ||| || || |||| | Sbjct 44365 TGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGG 44306 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 44305 TCTTCACAAAGATCTGCAT 44287 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || |||| ||||||||| ||||| |||||||||||| Sbjct 44669 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTG 44610 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| |||||| | |||||||| || | ||||| | Sbjct 44609 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATG 44550 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||| || || || || |||||||| Sbjct 44549 GTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44515 >seq6913 Length=53205 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | |||| | | | || || |||||||||| Sbjct 52785 GGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCA-TCTTCCAGCTGCTTGC 52843 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| ||||| |||||||||||||| |||||| || Sbjct 52844 CAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 52903 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| |||||| | |||||||| || | ||||| ||| || || |||| | Sbjct 52904 TGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGG 52963 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 52964 TCTTCACAAAGATCTGCAT 52982 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || |||| ||||||||| ||||| |||||||||||| Sbjct 53056 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTG 53115 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| |||| | ||||| |||||| | |||||||| | | ||| | Sbjct 53116 TCCTGGATCTTGGCCTTGGCGTTCTCAATGGTGTCGCTTGGCTCCACCGCCAGGGTAGTG 53175 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATC 133655 || || || |||| || || || || ||| Sbjct 53176 GTCTTCCCAGTCAAGGTCTTCACAAAGATC 53205 >seq6119 Length=68287 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || | ||| ||| | ||||| |||| Sbjct 55941 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCA-TCCTCCAGCT 55883 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| |||||||| |||||||| ||||| ||||| Sbjct 55882 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCT 55823 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| ||||| | |||||||| || | |||| ||| ||||||| Sbjct 55822 TGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGAGTGATGGTCTTGCCGG 55763 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 55762 TCAGTGTCTTGACAAAGATCTGCATG 55737 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| ||||| || || | ||| | | | || || |||| Sbjct 55713 ATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAAAGGGTGCGGCCA-TCTTCCAGCT 55655 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| |||||||| |||||||| ||||| ||||| Sbjct 55654 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCT 55595 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | || | | ||||| ||||| | |||||||| || | ||||| ||| ||||| | Sbjct 55594 TAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGTGATGGTCTTGCCTG 55535 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || |||||||| Sbjct 55534 TCAACGTCTTCACAAAGATCTGCAT 55510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483184449528120