Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq4806 149 7e-31 >seq4806 Length=94900 Score = 149 bits (164), Expect = 7e-31 Identities = 456/697 (65%), Gaps = 15/697 (2%) Strand=Plus/Minus Query 162120 ATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGA 162179 ||| |||||||| || || | ||||| |||| || ||||| | | || || Sbjct 48038 ATCAAACTTGTTGGCAAAGAAATGATGT---TTCTGTAACATCCAGCTCAAGTCTCCAAC 47982 Query 162180 TCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATC 162239 ||| || || || | || || ||||| || || | || || ||||| |||| || | Sbjct 47981 TCCAAAGACACATATAGAGCGGACGTGGACTCCATTACAGGGGGGATAAGGGGCACCCTT 47922 Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299 | |||||||||||| |||| |||||||| || |||| | || || | ||| || || Sbjct 47921 GGACACATCCCCCTCAAAGTAATGCCACTTCACAAACCGGGCAATTGCATTCATATCAGA 47862 Query 162300 GGTGTCGTACTTGTACACTGAC-GGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 ||||| |||| ||||| | || || || |||||||| | || | || ||| | | Sbjct 47861 AACATCGTATTTGT-CACTGGCAGGGACTGCACCAGGAACCTCAGGGATTCGCTGAATTG 47803 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||| | | ||| || ||||| ||||| || || | ||||||||| || | | Sbjct 47802 TTGCCCATAAGAATTCATCAGGACTGTACGTGTCTTTAGCCCACTCCATAAAAGCAAGAA 47743 Query 162419 CCGTT---TTATCGTATAGA-ATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCG 162474 || || || ||| | || | | || | |||| | |||| ||| || || Sbjct 47742 TTTTTCTGTTCTCTAATACATATTCCACAAACCT----CCTGCTGACAACAAAATAGGCA 47687 Query 162475 CTACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACT 162534 || ||||| || | |||| | | ||| || ||| ||| ||| ||| | || | Sbjct 47686 CTGCCAGAGAAAATGGGTGTATTGAGAGGTGGATGCTGTTTATCTATTCCCATATTTTTT 47627 Query 162535 ACCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGG 162594 | | | || || || || |||| ||| |||||| || ||| | | || | Sbjct 47626 AACTTGCCATCAACCACTTCGTGATGTTTCTTCCACCGCACCTCCTTGTTTGAAGGCATT 47567 Query 162595 TGTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTC-AGCTGACGCACCATCTCTAG 162653 | ||| || |||| ||| || |||| | ||| ||| | || | ||| || ||| | Sbjct 47566 TTTTCAGTTTCTAAACTATTTTCACCCTTGAGGGCTTTCAAACTCTC-CACTATTTCTTG 47508 Query 162654 ATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCT 162713 |||||||| | ||| || || |||| ||||| || || | |||||||| | ||||| Sbjct 47507 GTTGGTCTTGATGGGGAAATCCATGCCACAGAGGTTGATCAAGTATTTCCAGCTCACGCT 47448 Query 162714 GAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTA 162773 | ||| ||||||| | |||||| || || || || || | ||||| || || || Sbjct 47447 CCTCCTGTAGAGATCCTTCATACAGTTGAGGTCAGCTTGCACCCTGCTCCAGGATGCATA 47388 Query 162774 CACGACGCTCTCCAACCTAGTGGCGACAAAGACATTG 162810 ||| || ||||||| |||| | ||||||||| Sbjct 47387 CACTACACTCTCCAGTTGGCTGGCAATGAAGACATTG 47351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578149197364800