Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1203 206 4e-47 seq5777 183 4e-40 seq930 158 2e-32 seq9144 150 3e-30 >seq1203 Length=291960 Score = 206 bits (228), Expect = 4e-47 Identities = 185/231 (80%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| ||||||||||||||| |||| |||| ||| |||| ||| Sbjct 79324 TCTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCA 79271 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| || ||||||||||| |||| ||||||| |||||||| | Sbjct 79270 TGAGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGCCGAGGCCTCCC 79211 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | | |||||| ||||||| ||||||| Sbjct 79210 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGCGAGGTCCAGACGGCCGTGC 79151 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| |||||| ||||||| |||||||||||| |||||||||| Sbjct 79150 GCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCGGAGGGCACCA 79100 Score = 86.0 bits (94), Expect = 9e-11 Identities = 97/129 (75%), Gaps = 6/129 (5%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| ||||||||||||||| ||| ||||| |||| |||| ||| Sbjct 13170 TCTACAAGGTGCTGAAGCAGGTGCACCCCGACACC-----GCCAT-CTCCTCCAAGGCCA 13223 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 | ||||||| ||| || |||||| ||| |||| ||||||| | |||||| | Sbjct 13224 AGAGCATCATGACCTCCTTCTTCAACGCCATCTTCGAGCGCATCGCCGGAGAGGCCTCCC 13283 Query 725032 GCCTGGCGC 725040 ||||||||| Sbjct 13284 GCCTGGCGC 13292 >seq5777 Length=73217 Score = 183 bits (202), Expect = 4e-40 Identities = 180/231 (78%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||||||||| ||||||||||||||| |||| |||| ||| |||| ||| Sbjct 11352 TCTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCA 11405 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||| | || ||||||||||| ||| ||||||| | |||||| | Sbjct 11406 TGAGAATCATGAACCCCTTCGTCAACGACATCTCCGAGCGCATCGCCGGAGAGGCCTCCC 11465 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | | |||||||||||||| ||||||| Sbjct 11466 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGCGAGATCCAGACGGCCGTGC 11525 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | ||| || ||| |||||| |||||||||||| | |||||||| Sbjct 11526 GCCTGCTGCTGCCCGCCGAGCTGGCCCAGCACGCCGTCTCGGGGGGCACCA 11576 >seq930 Length=319869 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| || || |||| || ||| ||||| Sbjct 87695 TACAAGGTGCTGAAGCAGGTCCACCCCGACAC-----GGGCATC-TCGTCCAAAGCCATG 87748 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | |||||| ||| Sbjct 87749 AGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCGTCCCGC 87808 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| || ||| | | || ||||||||||| ||||||||| Sbjct 87809 CTGGCCCACTACAACAAGCGCTCGACCATCACCTCCCGGGAGATCCAGACGGCCGTGCGC 87868 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| ||||| ||||||| Sbjct 87869 CTCCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAAGGCACCA 87917 >seq9144 Length=24189 Score = 150 bits (166), Expect = 3e-30 Identities = 166/217 (76%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 724927 AGCAGGTGCACCCCCGA-ACCGTTGGGCCATCCTCCAACAAGTCCATGTCGATCATGAAC 724985 ||||||||| ||||||| |||| |||| ||| |||| ||||| ||||| | | Sbjct 11476 AGCAGGTGC-CCCCCGACACCGG-----CATC-TCCTCCAAGGCCATGAGCATCATAACC 11528 Query 724986 TCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCC 725045 || || ||||||||||| |||| ||||||| |||||||| |||||||||| || | Sbjct 11529 TCCTTCGTCAACGACATCTTCGAGCGCATCGCGGCCGAGGCCTCCCGCCTGGCGCACTAC 11588 Query 725046 AACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGC 725105 ||||||||| ||| ||| | | ||| ||||||||| |||| |||||| ||| | Sbjct 11589 AACAAGCGCTCCACCATCACCTCCCGCCCGATCCAGACGGCCGCGCGCCTCCGGCTGCCC 11648 Query 725106 GGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| ||||||| |||||||||||| |||||||||| Sbjct 11649 GGCGCGCTGGCCAAGCACGCCGTCTCGGAGGGCACCA 11685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174038679260306