Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6119 116 4e-21 seq7460 105 7e-18 seq6913 100 3e-16 >seq6119 Length=68287 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| || || || || ||||| ||||| || ||||||||||| | Sbjct 55964 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAA 55905 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| ||||| ||||| |||| | |||||||||||| || Sbjct 55904 AGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 55845 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || || || || || || || | ||||| | ||||| Sbjct 55844 ATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACC 55785 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || ||||| | || || || || || ||||| Sbjct 55784 TCCAGAGTGATGGTCTTGCCGGTCAGTGTCTTGACAAAGATCTGCAT 55738 Score = 109 bits (120), Expect = 6e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| || || || || ||||| ||||| || || || ||||| | Sbjct 55736 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAA 55677 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||||||||| || Sbjct 55676 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 55617 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || || || || ||| || || | ||||| | ||||| Sbjct 55616 ATGCCTTCTTTGTCCTGGATCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACT 55557 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| || || || || || || || || || |||||||| Sbjct 55556 TCCAGGGTGATGGTCTTGCCTGTCAACGTCTTCACAAAGATCTGCATTTT 55507 >seq7460 Length=44690 Score = 105 bits (116), Expect = 7e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || ||||| ||||| || |||||||||||| || ||| | Sbjct 44276 AGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGG 44217 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| ||||| |||| | |||||| || || || |||||||| Sbjct 44216 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCC 44157 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| || | |||||| | ||||| || || || Sbjct 44156 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTG 44097 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || || || || || || || |||||||| Sbjct 44096 ATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 44056 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||||| ||||| || |||||||||||| || ||| | || || ||| Sbjct 44492 AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATCTTCCAGC 44433 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| ||||| |||| | |||||| || || || |||||||| || || || || Sbjct 44432 TGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATC 44373 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| || | |||||| | ||||| || || || ||||| || || Sbjct 44372 TTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCA 44313 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| Sbjct 44312 GTCAAGGTCTTCACAAAGATCTGCAT 44287 >seq6913 Length=53205 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| || ||||| || ||||| ||||| || |||||||||||| || ||| | Sbjct 52768 CGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCA 52827 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| ||||| |||| | |||||| || || || |||||||| || Sbjct 52828 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTG 52887 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || ||||| || | |||||| | ||||| || || || ||| Sbjct 52888 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATG 52947 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || || || ||||| Sbjct 52948 GTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 52982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505151304404760