Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2821 118 8e-22 seq2308 100 2e-16 seq8067 96.9 3e-15 >seq2821 Length=167147 Score = 118 bits (130), Expect = 8e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| || || || |||||| | || ||||||||||||| ||||||||||| || Sbjct 93168 ATGGCCTTACCTCCATGTCATGCTCTCTGCCAGTTTTACGTTTTAAATGGTGAACTCTCT 93109 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 ||||| ||||||||| | || || || ||||| || || || ||||| |||||||| ||| Sbjct 93108 TGTCAGTTGTATCAACGTTCTGGAGATATGGGGCTGGGAGTACCGTTCAACATAGCTAGT 93049 Query 41169 TATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 || | || || || | |||||||| || ||||| Sbjct 93048 TACTCACTTCTTACTTCAATGATTGCCCATGTTAC 93014 >seq2308 Length=189564 Score = 100 bits (110), Expect = 2e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | || || |||||||| |||||||| |||||||||||||| |||||| |||| Sbjct 141384 TTTGTCATCTTCCCTATTCAATACCATGACATCTGGCAAATGTACAAGAAAGCAGAGGCC 141325 Query 43760 TCATTTTGGACAGCAGAAGAAGT 43782 |||||||||||||| ||||| || Sbjct 141324 TCATTTTGGACAGCTGAAGAGGT 141302 Score = 98.7 bits (108), Expect = 8e-16 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || || |||||||| ||||| ||||| || ||||||||||||| ||||| |||||||| Sbjct 133995 AATCCATTTGATTTCATGGAGAATATCTCTCTGGAAGGCAAAACTAACTTCTTTGAAAAG 133936 Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAGTGACAATAA---ATTTACT 44611 || || ||||||||||| | ||||| || ||| || || |||| ||| ||| Sbjct 133935 CGTGTAGGAGAATATCAAAGGATGGGTGTGATGTCAAGCCCTGCAGATAACTCATTCACT 133876 Query 44612 ACGGATGAAGATTTCTAA 44629 ||||| |||||||||| Sbjct 133875 TTGGATGCAGATTTCTAA 133858 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 || |||||| | || || ||||| | || ||||| || |||||||| || || ||||| Sbjct 135647 GGTGAACGAGTAGTAGCATTTGCTGCAGTTGAAGGAATCTTCTTTTCTGGCTCTTTTGCA 135588 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||||||| | ||||||||||| | |||||||| | || ||||| |||||| | Sbjct 135587 TCAATATTTTGGCTGAAGAAACGAGGGCTAATGCCTGGCCTTACTTTTTCTAATGAGCTG 135528 Query 44243 ATAAGTCGTGATGA 44256 || ||| | ||||| Sbjct 135527 ATTAGTAGAGATGA 135514 >seq8067 Length=36449 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||| || | |||||||| || ||||| ||||| || || || || ||||||||| Sbjct 30610 CAAGAAGTACAGATCCCAGAAGCTCGCTGTTTCTATGGCTTCCAGATAGCAATAGAAAAT 30551 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 |||| || || ||||| ||| | || ||||| || |||||||||||| Sbjct 30550 GTTCACTCCGAGATGTATAGTTTGCTAATAGACACTTACATCAAAGAT 30503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397266536823565