Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3601 91.5 2e-13 seq3511 86.0 7e-12 >seq3601 Length=132737 Score = 91.5 bits (100), Expect = 2e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 55492 CCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGC 55551 ||| |||||||| || |||||||| || || ||||||||||| |||||||||| ||| | Sbjct 125419 CCTCCTCGTGGCCCCGATGCCAACAGCTTCCACGGCTCAGATTTTGGGCAACAATGAGTC 125478 Query 55552 GTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTT 55606 | ||||| ||||| | |||||||||| |||||| || | || |||||| Sbjct 125479 TGTGGAGCCCTACACCAGCAACATCTACACCCGCCGGGTTCTCTCTGGGGAGTTT 125533 >seq3511 Length=131955 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 || ||||| |||| | ||| || | || || ||||| ||||| ||||||||||| Sbjct 6373 GTAAAGATATATCTAGGGCTTGCAGAGTCTTTTCCACCATGCAGCCTAGTTCCAAACTGA 6432 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 ||| ||| | || | ||| ||||||||| |||||| ||||| ||||||||||| ||| Sbjct 6433 CCAATGGGTTGAAGTAAGTTCAGGTTGTTGCTGCCCACAAAATTTTGAGCCAAATTAACA 6492 Query 152149 ATCGT 152153 || || Sbjct 6493 ATAGT 6497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546948459257400