Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6119 141 8e-29 >seq6119 Length=68287 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||||||||||| | || ||||| || ||||| || Sbjct 55737 CATGCAGATCTTTGTCAAGACACTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCAAG 55796 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| || || || || || |||||||||||||| || |||||||| Sbjct 55797 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCCGATCA 55856 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || ||||| || |||| || || ||| |||| || ||||| Sbjct 55857 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACCCTTTCTGACTACAA 55916 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | ||| | || ||||| || | |||||||| Sbjct 55917 CATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGCAT 55967 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||| |||||| | || || || |||||||| || Sbjct 55510 ATGCAGATCTTTGTGAAGACGTTGACAGGCAAGACCATCACCCTGGAAGTGGAGCCAAGT 55569 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || ||| || || || |||||||||||||| || |||||||| Sbjct 55570 GACACCATTGAGAATGTAAAAGCTAAGATCCAGGACAAAGAAGGCATTCCTCCCGATCAG 55629 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | ||| |||| || || || Sbjct 55630 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCTGACTATAAT 55689 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | ||| | || ||||| || | |||||||| Sbjct 55690 ATCCAGAAGGAGTCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGCAT 55739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434705762957760