Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7460 136 9e-27 seq6913 127 5e-24 seq39113 84.2 5e-11 >seq7460 Length=44690 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| |||||||| ||||| || || |||| ||||| |||| | || Sbjct 44280 ACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGT 44221 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| || | || ||||| || ||||| || Sbjct 44220 GCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCC 44161 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| || || |||||||| | ||||| || | Sbjct 44160 TTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAG 44101 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || ||||| || || | || | |||||||| Sbjct 44100 GGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATTTT 44056 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||| | |||||||| ||||| || || |||| ||||| |||| | || Sbjct 44507 CGCAGACGCAGGGCCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTG 44448 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| |||||||| ||||| ||||| || | || ||||| || ||||| ||| Sbjct 44447 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCT 44388 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || || |||||||| | ||||| || | Sbjct 44387 TCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGG 44328 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || ||||| || || Sbjct 44327 GTGATGGTCTTCCCAGTCAAGGTCTT 44302 Score = 91.5 bits (100), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| || || ||||| || | || ||||| || ||||| |||||| Sbjct 44672 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCC 44613 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || || |||||||| | ||||| || | ||| Sbjct 44612 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTG 44553 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||| || ||||| || || Sbjct 44552 ATGGTCTTCCCAGTCAAGGTCTT 44530 >seq6913 Length=53205 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| |||||||| ||||| || || |||| ||||| |||| | || | ||||| Sbjct 52770 CAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATC 52829 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||| ||||| || | || ||||| || ||||| ||||||||||| Sbjct 52830 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTC 52889 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| || || |||||||| | ||||| || | ||||| || Sbjct 52890 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGT 52949 Query 225681 CTTGCCCGTCAAAGTTTT 225698 ||| || ||||| || || Sbjct 52950 CTTCCCAGTCAAGGTCTT 52967 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| |||||||| ||||| || || |||| | |||| | || Sbjct 52989 ACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGCCTTCGTCGGAAAGCGT 53048 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| |||||||| ||||| ||||| || | || ||||| || ||||| || Sbjct 53049 GCTGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCC 53108 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||||||||| |||||||| Sbjct 53109 TTCCTTGTCCTGGATCTT 53126 >seq39113 Length=17617 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632 || || || || || || || ||||| ||| | ||||| || ||||||| || |||||| Sbjct 6571 ACAGCCCACGCATTCGTAATAATTTTTTTTATAGTTATACCCATTATGATCGGAGGTTTC 6630 Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692 ||||| ||||| | || ||||| || || || || || || || || || | | || Sbjct 6631 GGAAACTGATTAATCCCATTAATAATCGGAGCACCAGACATAGCATTCCCGCGAATAAAT 6690 Query 7693 AATATAAGTTTTTGATTACTACCGCC 7718 |||||||| |||||| | |||| || Sbjct 6691 AATATAAGCTTTTGACTTTTACCACC 6716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191933580504422