Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8067 116 3e-21 seq2308 109 5e-19 >seq8067 Length=36449 Score = 116 bits (128), Expect = 3e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 |||| ||||||||||| ||||| || || || || | || |||||||| |||||||| | Sbjct 28358 CTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 28417 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | ||||||||||| || ||||| | ||||||||||| || ||||| || || ||||||| Sbjct 28418 TGAGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACG 28477 Query 4690 CTAC 4693 | || Sbjct 28478 CAAC 28481 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/144 (73%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 4790 TAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 ||||| ||||| || || |||| || |||||||||||||| | |||||||| || Sbjct 30485 TAATTACCTTTTCTCG---GGATCTTTGATGTAAGTGTCTATTAGCAAACTATACATCTC 30541 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 || || | ||||||||| || ||||| || || || || || | |||||||| | || Sbjct 30542 GGAGTGAACATTTTCTATTGCTATCTGGAAGCCATAGAAACAGCGAGCTTCTGGGATCTG 30601 Query 4910 AACTTCGTTACAAAATCTTTCTAC 4933 ||||| | | ||| | |||||| Sbjct 30602 TACTTCTTGGCTAAAACGTTCTAC 30625 >seq2308 Length=189564 Score = 109 bits (120), Expect = 5e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||| |||||||| || |||||||| || | || ||||||| |||| || || Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||||||||| | ||||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 135633 Query 4692 ACTAATCG 4699 |||| ||| Sbjct 135634 ACTACTCG 135641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 || |||| |||||||| || || |||| ||||||||||| ||||| || ||||| || Sbjct 137484 GGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGTTTTCCATG 137543 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 |||||||| || || || || || | |||||||| ||||| ||||| Sbjct 137544 GCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTGACTTGTACTTC 137590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426846029859629