Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2308 120 4e-22 seq8067 102 1e-16 seq3601 91.5 2e-13 >seq2308 Length=189564 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||||||||| | || |||||||| || || || |||||||| || ||||| || Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||||||||||| || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGC 135632 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| || ||||| |||||||||| || ||||| || || || || |||||||||||| Sbjct 133901 GACATCACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCT 133960 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 |||| || ||||| ||||| |||||||||||||| Sbjct 133961 TCCAGAGAGATATTCTCCATGAAATCAAATGGATT 133995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698 || |||||||||||||||||||| ||||||||||| || ||||| | ||| || ||| | Sbjct 141302 ACCTCTTCAGCTGTCCAAAATGAGGCCTCTGCTTTCTTGTACATTTGCCAGATGTCATGG 141361 Query 48699 TATTGGATTGGGAAAATAACAAA 48721 ||||| || ||||| || ||||| Sbjct 141362 TATTGAATAGGGAAGATGACAAA 141384 >seq8067 Length=36449 Score = 102 bits (112), Expect = 1e-16 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| ||||| | ||| || || || || || || ||||||| || | || | Sbjct 28358 CTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 28417 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 |||||||||||||||| || |||| ||||||||||| || ||||| || || ||||| | Sbjct 28418 TGAGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACG 28477 Query 48283 C 48283 | Sbjct 28478 C 28478 Score = 89.7 bits (98), Expect = 7e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTG 48698 || ||||| |||||||| || || |||| || | || ||||| |||||||||||| | Sbjct 33333 ACCTCTTCTGCTGTCCAGAAGGAAGCCTGAGCCTGCTTGTACATTTTCCATATATCAGGG 33392 Query 48699 TATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATAGGTTCC 48752 || ||||||||||| || ||||||| || || |||||| | || ||||||| Sbjct 33393 TACTGGATTGGGAAGATGACAAATCGATGGGGGTTTTTTCTTAAGAGAGGTTCC 33446 >seq3601 Length=132737 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || ||||||||||||||||| || ||||| |||||| || || || || | || || Sbjct 120265 ACACGTTTCATAAAGAGATCTGGGATCCAGAGAGCATAGAAAAGGTCCCGAGCCCTCTGC 120206 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 || || || || || || || || | ||||||||||| | | |||| | ||||||||| Sbjct 120205 TCCTCCTTCCCAGTGTTTTTCTTCAAGTCGAGAAACTCAAAGACATCAAAGTGCCATGGT 120146 Query 78123 TCTAGATATATTGCCATAACTCCAGGTC 78150 || || || || || | ||||||||| Sbjct 120145 TCCAGGTAGATGGCAAAGGCTCCAGGTC 120118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694329167740320