Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2308 109 6e-19 seq8067 98.7 1e-15 seq919 86.0 7e-12 >seq2308 Length=189564 Score = 109 bits (120), Expect = 6e-19 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 |||||| | |||| ||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct 137476 TTTCTTTAGGATCTTTTATATAAGTATCAATAAGTAAACTATACATTTCTGAATGAATGT 137535 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861 |||| || |||||||| || ||||| ||||| | ||||| Sbjct 137536 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTC 137575 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| |||||||||| ||||||||||| || | || ||||||| |||||||| || Sbjct 135514 TCATCTCTACTAATCAGCTCATTAGAAAAAGTAAGGCCAGGCATTAGCCCTCGTTTCTTC 135573 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| ||||| || || |||||||| || || ||||| || ||||| || Sbjct 135574 AGCCAAAATATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCT 135633 Query 23653 AC 23654 || Sbjct 135634 AC 135635 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/150 (74%), Gaps = 8/150 (5%) Strand=Plus/Plus Query 23153 TCATTT--TTTAAAAATCTTCATCTAAAGTGAAT---TTCACTGCTTTATCACTATTCAT 23207 |||||| |||| |||||| |||| ||||||||| || |||| | || ||| Sbjct 133849 TCATTTCTTTTAGAAATCTGCATCCAAAGTGAATGAGTTATCTGC---AGGGCTTGACAT 133905 Query 23208 AACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAA 23267 |||||||| |||||||||| || ||||| |||| || || || || || || || | Sbjct 133906 CACACCCATCCTTTGATATTCTCCTACACGCTTTTCAAAGAAGTTAGTTTTGCCTTCCAG 133965 Query 23268 TGATATATTTTCCATAAAATCAAATGGATT 23297 || ||||| ||||| |||||||||||||| Sbjct 133966 AGAGATATTCTCCATGAAATCAAATGGATT 133995 >seq8067 Length=36449 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || ||||| | |||||| || || || | ||||||||||| |||| || | Sbjct 28358 CTTCATCTCTGCTAATAAGTTCATTGGAGAAAGTAAGGCCTGGCATTAACCCTCTCTTCT 28417 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | |||||||||||| ||||| | || |||||||| || || || ||||| ||||| | Sbjct 28418 TGAGCCAAAATATTGCTGCAAAAGCACCAGAAAAGAAGATTCCTTCGACAGCAGCAAACG 28477 Query 23651 CCAC 23654 | || Sbjct 28478 CAAC 28481 >seq919 Length=329115 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8534 CTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACA 8593 || |||||||||| |||| |||||||| |||| |||||||||| | |||||||||||| Sbjct 93170 CTAGAACTCCTGAGCTCAACAGATCCACCAGCCTTGGCCTCCCAAGGAGCTGGGATTACA 93229 Query 8594 GGCATGAGCCAC 8605 |||| ||||||| Sbjct 93230 GGCAGGAGCCAC 93241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521233037998200