Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq3009 132 7e-26 seq276 127 3e-24 >seq3009 Length=154878 Score = 132 bits (146), Expect = 7e-26 Identities = 180/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 || || | ||| |||| |||||||| || ||||| || ||| ||||||||| |||||| Sbjct 31309 CCTATCAAGATCAGTCTGGTGGTCTGAAATAGTTGTTCATCATCCCATTCTGGGTGTTCT 31368 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 || |||| || || || | |||||||||| ||||| | ||||| |||||||| Sbjct 31369 CCCTTAAGAATGTCACAGACTCGATTGTGTTCCCGAAGCCACAATGTGGCATACATCATC 31428 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACT 9414 ||||| || |||| |||||| | || || || |||| | || || || || | Sbjct 31429 AGCCCTGGAACCAAGCCAAAGACTTCCTGTCCTACAGAAAATTTCAGGTGATCAGGGATG 31488 Query 9415 TCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCG 9474 | ||| ||||||||||| | |||| ||||| || | || ||||||||||| || Sbjct 31489 TGGGGTGGATAGATCATTTCTGCCTGAGTTTCTTTCACAGTAGGTGGATACATTTCTCCA 31548 Query 9475 TCAATCATCTG 9485 |||||||||| Sbjct 31549 CCAATCATCTG 31559 Score = 123 bits (136), Expect = 4e-23 Identities = 166/226 (73%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 8363 AACCCCACGTCT-CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTT 8421 || ||||| ||| || || || || || ||||||||||| | || ||||||||| | || Sbjct 28501 AAGCCCAC-TCTACCCCCAAAAGTACTTGGCTTCCAGTATTCAGGCGAGCAGATGGCATT 28559 Query 8422 CGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGAT 8481 |||| || ||||| | |||||| |||||||| | || | ||| ||||||| ||||| Sbjct 28560 TCCCATAAGACCTTTCAAGGAGAAGGGAGCCCCAAGTTCAATCATGGTCTCACCAAAGAT 28619 Query 8482 GGCGTTGGGACGGGGCTTTTCCACCAAGAA-TCCGGTGTACAGCTCCACAGCCTCGACGT 8540 ||| ||||| ||||||| || |||||| | | |||||| |||| ||| || | | Sbjct 28620 GGCTCCAGGACGTGGCTTTT-CAACAAGAAGAGCAGGGTACAGTTCCATAGCTTCAATAT 28678 Query 8541 CTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 |||| || || | ||||| ||||| || || ||||| ||||| Sbjct 28679 CTCCATAGAGCTCTTCAAGTTCTGCAGCCATTTCTTTTTCACCTGT 28724 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 ||||||||||||||| || ||||| |||||||| || ||| | ||| ||| | || Sbjct 32567 TCTTACCCCATGTCCAAGACCTTTTGTGAAGGCTGGTCCTTTCTGAGTATCTGTCTTGAA 32626 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 | ||||| |||||||| ||| |||| |||| ||||| | || ||||| || ||||| Sbjct 32627 GTATTGGTGAGTGAAATGCTGGGCAAAGAAGGTGAACATGACATTCGTGCCTTGAGGATC 32686 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806 ||| |||| | |||| || | | |||||| |||| Sbjct 32687 AGGAATGAATTTTCTCCTTAGCAAAAATTTTTCTACAA 32724 >seq276 Length=528478 Score = 127 bits (140), Expect = 3e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 || |||||| |||| || | | ||||| || ||||||||||||||||| | || ||| Sbjct 489050 TTCACGATCTCGAAGCCAGTGGCCCCGCCAAAAGTGCTGGGCTTCCAGTATTCAGGAGAG 489109 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| |||| ||| ||| || || | |||||| ||||| |||| || | ||||| Sbjct 489110 CAGATGGGGTTCCCCAAGAGCCCCTTCAAGGAGAAGGGAGCGCCCATTTCTACCATGCTT 489169 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || || ||| ||||||| | ||| || ||||||| || | ||| | ||||||| Sbjct 489170 TCTCCAAATATGCCGTTGGGGTAGATCTTCTCTACCAAGAGGCCTGGGTAGAACTCCACA 489229 Query 8531 GCCTCGACGTCTCCGTAAAG 8550 || || | |||||| || || Sbjct 489230 GCATCAATGTCTCCATACAG 489249 Score = 89.7 bits (98), Expect = 7e-13 Identities = 167/240 (70%), Gaps = 14/240 (6%) Strand=Plus/Plus Query 9253 GTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCAC 9312 ||||||||||| || ||||||||| ||| || ||||| || ||||| | ||||| Sbjct 491291 GTGGTCTGGAAGAGCTGCTCGTCATCCCAGGTGGGGTGTTCCTGCTTCAGCAGGTCGCAG 491350 Query 9313 ACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCA 9372 || | |||||| || | ||||||| ||||| |||| || ||| || || | ||||||| Sbjct 491351 ACGCGGTTGTGCTCACGCAGCCAGAGGGTGGCATACACCAGGAGGCCCGGGAGCAGGCCA 491410 Query 9373 AAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCG-GGC---ACTTCGGGAGGATAGAT 9428 || |||| || || | || || || | | | ||| |||| |||||||| Sbjct 491411 AACACCTCCTGGCC-CGTGGCAAACTTCTGCTCTGGCGGCGTGCCTTC---TGGATAGAT 491466 Query 9429 CATGTGCACCTGGACGTCTTTGACC---GAGGGGGGATACATTTCACCGTCAATCATCTG 9485 ||||||||| | || ||| ||| | ||||||||||| || || | | |||||| Sbjct 491467 CATGTGCAC---GGCGGCTTCCACCACTGTTGGGGGATACATCTCTCCCTGCACCATCTG 491523 Score = 87.8 bits (96), Expect = 3e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 9069 ATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGATTTTG 9128 ||||||||| | | |||||||| |||| | ||| || || | ||||| || || Sbjct 490861 ATCCGGCATTAAGGCGTGCCAGTGGTACAGCTGGTTGAATTCCAGAGCAATACGGTTCTG 490920 Query 9129 GTACTGGAACGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAAATGGTAGCC 9188 ||||||||| | |||||||| ||||| || | ||| ||||| | ||||||||| Sbjct 490921 ATACTGGAACTGGATGCCAAAGAGAAGTTCTGGGTCGAACGTAAGCTGCAGATGGTAGCC 490980 Query 9189 GCTGAGCTGCTGAACGTATTGCGTCACGATAATGTTGATGGTTTCCCC 9236 |||||| ||||| || |||| | | || ||| ||||| || || || Sbjct 490981 GCTGAGATGCTGGACATATTCCTCAATGACAATTTTGATCGTCTCACC 491028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716526309971520