Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Python_20bivittatus_20[refseq_20GCF_5F000186305.1_202013-09-15] 39,113 sequences; 1,435,052,152 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7460 132 4e-26 seq6913 125 7e-24 seq6119 125 7e-24 >seq7460 Length=44690 Score = 132 bits (146), Expect = 4e-26 Identities = 173/237 (73%), Gaps = 8/237 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||| ||||| |||||||| Sbjct 44285 CCACCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 44226 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| || || ||||| | ||| ||||| | ||| Sbjct 44225 AGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44166 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | || ||||||||| ||| || ||| |||| | || |||||||| | ||| Sbjct 44165 ATGCCTTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATGGTGTCGCTTGGCTC 44110 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTATC 41868 |||||||| || || || || || |||| ||||| || || |||||||| || || Sbjct 44109 CACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCATTTTCTC 44053 Score = 127 bits (140), Expect = 2e-24 Identities = 168/231 (73%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || ||| ||||||||| ||||| |||||||| Sbjct 44513 CCACCCCGCAGACGCAGGGCCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAA 44454 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||| || || ||||| | ||| ||||| | ||| Sbjct 44453 AGCGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44394 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | || ||||||||| ||| || ||| |||| | || |||||||| | ||| Sbjct 44393 ATGCCTTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATGGTGTCGCTTGGCTC 44338 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| ||||| || || |||||||| Sbjct 44337 CACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44287 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 |||||||| || ||||| | || || |||||||||||||| || ||||| | ||| ||| Sbjct 44690 TAGTCGGAAAGCGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGG 44631 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTC 41802 || | |||| || ||||||||| ||| || ||| |||| | || ||||| Sbjct 44630 TCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATGGTGTC 44575 Query 41803 GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||||||||||| || || || || || |||| ||||| || || |||||||| Sbjct 44574 GCTTGGCTCCACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 44515 >seq6913 Length=53205 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| ||||| |||||||| || ||||| | || || Sbjct 52774 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTGCGGCCATCTTCC 52833 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| ||||| | |||| || ||||||||| | Sbjct 52834 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGG 52893 Query 41774 ATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || || ||| |||| | || |||||||| | ||||||||||| || || || Sbjct 52894 ATCTTGGCCTT----GACGTTCTCAATGGTGTCGCTTGGCTCCACCTCCAGGGTGATGGT 52949 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| || || |||||||| Sbjct 52950 CTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 52982 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/226 (69%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||| ||| | |||||| Sbjct 52984 CCACCACGCAGACGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGCCTTCGTCGGAA 53043 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||| | || || ||||||||||| || || ||||| | ||| ||||| | ||| Sbjct 53044 AGCGTGCTGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 53103 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTC 41811 | || ||||||||| ||| || ||| | || | || |||||||| | ||| Sbjct 53104 ATGCCTTCCTTGTCCTGGATCTTGGCCTT----GGCGTTCTCAATGGTGTCGCTTGGCTC 53159 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATC 41857 |||| ||| || | || || || |||| ||||| || || ||| Sbjct 53160 CACCGCCAGGGTAGTGGTCTTCCCAGTCAAGGTCTTCACAAAGATC 53205 >seq6119 Length=68287 Score = 125 bits (138), Expect = 7e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||||||||| ||||| ||||| || |||||||| Sbjct 55955 AGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGA 55896 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| || || | |||| || || Sbjct 55895 CCATCCTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCT 55836 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||| || ||||| | | ||||| || | ||||||||||| || Sbjct 55835 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTTGGCTCCACCTCCAGAGTG 55776 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| ||||| || || ||||||||| Sbjct 55775 ATGGTCTTGCCGGTCAGTGTCTTGACAAAGATCTGCATG 55737 Score = 114 bits (126), Expect = 1e-20 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || ||||| || ||| ||||||||| || |||||||| || |||||||| Sbjct 55727 AGACGCAGGACAAGATGGAGGGTGGACTCCTTCTGGATATTATAGTCAGAAAGGGTGCGG 55668 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| || || | |||| || || Sbjct 55667 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCT 55608 Query 41765 TTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| || | || |||| || | | ||||| || | |||||| |||| || Sbjct 55607 TTGTCC-TGGATCTTAGCTTTTACATTCTCAATGGTGTCACTTGGCTCCACTTCCAGGGT 55549 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || |||| |||||| || || |||||||| || Sbjct 55548 GATGGTCTTGCCTGTCAACGTCTTCACAAAGATCTGCATTTT 55507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462077973795600