Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1849 84.2 3e-11 >seq1849 Length=224522 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| || | ||||| | ||| | || || || ||||| || ||||||||||| || Sbjct 144637 AGGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAGTAACTAGCTATGTTGAAAGGA 144696 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || || ||||| |||| ||| || ||||| || || | Sbjct 144697 ACTCCCAGTCCCATGTCTCCAGAACGCTGATACAACTGACAAGAGAGTTCACCATTTGAA 144756 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGC 145913 | ||| || ||||| || ||||| || || | ||||| || Sbjct 144757 ATGTAAAATTGGCAGAGAGCATGGCATGGAGGTAAAGCCATTGC 144800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590018308637200