Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1849 84.2 2e-11 >seq1849 Length=224522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || || ||||||||||| | ||| ||||| |||||||| || || | ||||||||| ||| Sbjct 145821 TACTCAGCTCCAAAATGTCGCCACTGGAAGCCATAAACGGGACCTAAGTCTCCTTCCTCT 145880 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 ||| | | || || | || ||||| | || ||| ||||| ||||||||||| Sbjct 145881 CTAGAAAAAAATCCTTGTTTGTCTAAGAATTGCCGAGAACCATTGGCATCCCAAAT 145936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346750484410100