Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1849 132 4e-26 >seq1849 Length=224522 Score = 132 bits (146), Expect = 4e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||||| |||||||| ||| || |||||||||||| || | ||| |||| | || Sbjct 144798 AATGGCTTTACCTCCATGCCATGCTCTCTGCCAATTTTACATTTCAAATGGTGAACTCTC 144739 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| ||||||| || || | || ||||||||||| ||||||||||| || || || Sbjct 144738 TTGTCAGTTGTATCAGCGTTCTGGAGACATGGGACTGGGAGTTCCTTTCAACATAGCTAG 144679 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| | || ||||| | |||||||| |||||||||| Sbjct 144678 TTACTCACTTCTTACTTCAATGATTGCCCATGTTACAG 144641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399145420113850