Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq79 129 5e-25 >seq79 Length=1654135 Score = 129 bits (142), Expect = 5e-25 Identities = 119/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105 ||||||| || | | |||||||| ||||| ||||| || || ||||| ||||| || | Sbjct 1258313 CCACCTCCTCCTGGCTGGTGTACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGG 1258254 Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165 |||||| || ||||||||| || || ||||| || ||||||||||||||||| |||| Sbjct 1258253 TGCCCAGGTTCTGCTGGTTGCTCTTCCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGCG 1258194 Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGC 23196 | || ||||| ||| ||||||||||| || Sbjct 1258193 TCCCTGTCTCCGTCTGGGACTCGATGATGGC 1258163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445722213405600