Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq220 87.8 1e-12 >seq220 Length=1126679 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 3619 TGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTT 3678 |||| || ||||||||||||| ||||| ||||| || ||||||||| |||||| | | Sbjct 324563 TGAACTGCTATATTTTGCTGATGTATGTGCTGGCCCTGGTGGTTTCTCAGAATATGTCCT 324504 Query 3679 ATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTA 3721 ||||| ||||| ||| || ||||||| ||| ||||| ||| Sbjct 324503 CTGGAGGAAGAAGTGGCATGCAAAAGGTTTTGGGATGACCTTA 324461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276526871958790