Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1849 98.7 9e-16 >seq1849 Length=224522 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || |||||||| |||| ||| |||| | || || || || || ||||| |||||| Sbjct 144637 AGGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAGTAACTAGCTATGTTGAAAGGA 144696 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||||| ||||||||||| || | |||||||| |||||| || || ||||| | | Sbjct 144697 ACTCCCAGTCCCATGTCTCCAGAACGCTGATACAACTGACAAGAGAGTTCACCATTTGAA 144756 Query 20357 ACATAAAATTGACA 20370 | |||||||| || Sbjct 144757 ATGTAAAATTGGCA 144770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441329048921200