Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq79 131 3e-25 >seq79 Length=1654135 Score = 131 bits (144), Expect = 3e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| | ||| |||| |||||| || || |||| Sbjct 1264862 CCTGCTTCCAGCCGTAGAAGTGCATACTGGTCAGCTTGCCGTAGTTGGGCTCCGCAATGT 1264803 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| ||||||||||| ||||||||||| | | |||| || || ||||| || | | Sbjct 1264802 GGATGTTGAGAGACTGGCTCTGGTCGATGAAGGCCCCCCGGTCGGCCGCCATCTTCAGGA 1264743 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||||||||||||| |||||||||||||||||| Sbjct 1264742 TGGTCTTCTGCGAGATCTCCCACACCGTCTTG 1264711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795076380240800