Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq79 86.0 7e-12 >seq79 Length=1654135 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || ||||||||||| || || || || ||||| |||||||| Sbjct 1258157 TGGTACGCCATCATCGAGTCCCAGACGGAGACAGGGACGCCCTACATGCTCTACAAGGAC 1258216 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || ||| |||||| ||||| |||| |||| || |||||| || || || ||| Sbjct 1258217 TCCTGCAACCGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTCTGC 1258276 Query 75998 ACGGAAATTTTAGAGTACAC 76017 || || ||| | |||||||| Sbjct 1258277 ACCGAGATTGTGGAGTACAC 1258296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596510465038400