Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1305 91.5 3e-13 >seq1305 Length=349135 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || || || |||||||| ||| || ||| || || || ||||| || |||||| Sbjct 265564 AAAATCCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGCTGATCTTTGCTGGAAAG 265623 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||| |||||||| | ||| | | || |||||| ||||||||||||| ||||| || Sbjct 265624 CAGTTAGAAGATGGCCGCACTCTCTCTGACTACAACATCCAGAAAGAGTCCACTCTCCAT 265683 Query 206374 CTTGT 206378 ||||| Sbjct 265684 CTTGT 265688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181700723313530