Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1849 96.9 4e-15 >seq1849 Length=224522 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || || ||||| | ||| | || || || ||||| || ||||||||||| Sbjct 144633 CTTCAGGCCTGTAACATGGGCAATCATTGAAGTAAGAAGTGAGTAACTAGCTATGTTGAA 144692 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || || | ||| |||| ||| || ||||| || || | Sbjct 144693 AGGAACTCCCAGTCCCATGTCTCCAGAACGCTGATACAACTGACAAGAGAGTTCACCATT 144752 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 | | |||||| ||||| || ||||| || || | ||||| || Sbjct 144753 TGAAATGTAAAATTGGCAGAGAGCATGGCATGGAGGTAAAGCCATTGC 144800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583430161752000