Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thamnophis_20sirtalis_20[refseq_20GCF_5F001077635.1_202015-06-26] 7,930 sequences; 1,424,897,867 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq750 136 5e-27 >seq750 Length=573183 Score = 136 bits (150), Expect = 5e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| |||| || |||| || | || || ||||| || || ||||| || || || Sbjct 118275 ATAGCAGGAGCTTTATGGTGGTACTACATATCAAAAGGAATTGAGTATCTGGACACAATA 118216 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 |||||||| | |||||||||||||||||| | || ||| | || || || |||||||| Sbjct 118215 TTCTTCATCCTAAGAAAGAAATTTAACCAAATCAGTTTTCTTCATGTCTATCACCATTTC 118156 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || |||||||||||| | ||| | || || |||||| ||||||||||||| Sbjct 118155 ACTATGTTTACTTTATGGTGGGTTGGCATCAAATGGGTTGCAGGAGGACA 118106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603121009703200