Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq25602 102 7e-17 >seq25602 Length=68118 Score = 102 bits (112), Expect = 7e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATC 19030 ||||| || |||||||| || | | || ||||||||| || ||| || ||| | || Sbjct 8861 AATGGCTCTCCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGGGAACTCTC 8920 Query 19031 CTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGG 19090 || || |||| ||| | || || || ||||| || || |||||||||||||| ||| | Sbjct 8921 TTGTCAGTTATATCAGCGTTCTGGAGACATGGGACTGGGTGTACCGTTCAACATAGCTAG 8980 Query 19091 ATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGG 19129 ||| |||||||||| | || | || ||||||||||| Sbjct 8981 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAGG 9019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399363369972735