Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq25602 87.8 1e-12 >seq25602 Length=68118 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || || ||||||||||| ||||| ||||| ||||||| ||| || | ||||||||| ||| Sbjct 7376 TACTCGGCTCCAAAATGTCTCCACTGGAAGCCATAAATAGGACCTAAGTCTCCTTCCTCT 7317 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 ||| | || || | || ||||| | || ||| ||||| ||||||||||| | Sbjct 7316 CTAGAGAAAAATCCCTGTTTGTCTAAGAATTGCCGAGAACCATTGGCATCCCAAATCTTA 7257 Query 97522 ACACCAGATGCTGCAAGCTCTTT 97544 || || || | ||||||||| Sbjct 7256 ACTCCCTTAGCAGAAAGCTCTTT 7234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346661928022310