Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq25602 109 4e-19 >seq25602 Length=68118 Score = 109 bits (120), Expect = 4e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 ||||||| | |||||||| ||| || ||||| |||||| || ||| ||| | || Sbjct 8861 AATGGCTCTCCCTCCATGCCATGCTCTCTGCCAGTTTTACATTTTAAATGGGGAACTCTC 8920 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||| | ||||| || || | || |||||||||||||| || ||||| || || || Sbjct 8921 TTGTCAGTTATATCAGCGTTCTGGAGACATGGGACTGGGTGTACCGTTCAACATAGCTAG 8980 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 |||| | || ||||| | |||||||| |||||||||| Sbjct 8981 TTATTCACTTCTTACTTCAATGATTGCCCATGTTACAG 9018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399043482616435