Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10]
28,883 sequences; 1,532,390,814 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq25442 91.5 1e-13
seq27101 82.4 8e-11
>seq25442
Length=71287
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| |||||||| |||||| ||||||| | ||||| || ||||| |||||||| ||
Sbjct 26898 TCTTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTA 26839
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | |||||| ||||||||||||| | ||| |
Sbjct 26838 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATG 26779
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || || ||||| || || || || || |||||
Sbjct 26778 GTTTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 26744
>seq27101
Length=56424
Score = 82.4 bits (90), Expect = 8e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| ||||||| | ||||| ||||| || |||||||| ||
Sbjct 14642 TCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 14583
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | |||||| ||||||||||||| | || |
Sbjct 14582 TCTTGGATCTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCCAGAGTGATG 14523
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || ||||| || || || || || |||||
Sbjct 14522 GTCTTCCCAGTCAAGGTCTTCACAAAGATCTGCAT 14488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495884902293600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |