Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq25428 98.7 1e-15 >seq25428 Length=70394 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| ||||| || || || ||||| ||||||||| Sbjct 13367 CTGTGGTACGCCATCATCGAGTCTCAGACGGAGACGGGGACGCCCTACATGCTCTACAAG 13308 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 || || || ||||| |||||||| | || |||||||||||||| || ||| || Sbjct 13307 GACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTC 13248 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| || ||||| |||||| || Sbjct 13247 TGCACCGAGATTGTGGAGTACACC 13224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740791649839080