Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq28662 86.0 3e-12 >seq28662 Length=510139 Score = 86.0 bits (94), Expect = 3e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 3619 TGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTT 3678 |||| || | ||||||||||| ||||| ||||| || ||||||||| |||||| | | Sbjct 140862 TGAACTGTTGTATTTTGCTGATGTATGTGCTGGCCCCGGTGGTTTCTCAGAATATGTCCT 140803 Query 3679 ATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTT 3738 ||||| ||||| ||| || ||||||| ||| ||||| ||| | | ||||||||| Sbjct 140802 CTGGAGGAAGAAGTGGCATGCAAAAGGTTTTGGGATGACCTTAAAAGGACCAAATGATTT 140743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276456249935149