Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq27101 89.7 4e-13 >seq27101 Length=56424 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || || || || || || ||||||| || ||||| | Sbjct 14484 AAAAATGCAGATCTTTGTGAAGACCTTGACTGGGAAGACCATCACTCTGGAGGTGGAGCC 14543 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || ||| ||| | || || |||| || || ||||| ||||| || ||||| ||||| Sbjct 14544 CAGCGACACCATTGAGAATGTCAAGGCTAAGATCCAAGATAAGGAAGGCATTCCCCCCGA 14603 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 || || | || || ||||||||||| ||| | || || Sbjct 14604 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGA 14642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419580250890895