Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq25428 104 2e-17 >seq25428 Length=70394 Score = 104 bits (114), Expect = 2e-17 Identities = 89/108 (82%), Gaps = 8/108 (7%) Strand=Plus/Plus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||||||||||| |||||||||||||||||||||| |||||| || | ||||| Sbjct 13228 TACTCCACAATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTG 13287 Query 146740 CTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACG--GTCCCC 146782 || ||| |||||||| |||||||||||||||||| | |||||| Sbjct 13288 CT---CTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTCCCC 13332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475329126379920