Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq10558 86.0 1e-11 >seq10558 Length=413728 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39168 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 39227 |||||| |||||| | ||| ||||||| |||| || || |||||||||||||||||| Sbjct 114583 TCATTAGAAAAAGTAAGTCCGGGCATTAGACCTCGTTTCTTTAGCCAAAATATTGATGCA 114524 Query 39228 AAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTAT 39274 ||| | ||||||||| || || || || |||||||||| ||| Sbjct 114523 AAAGAGCCAGAAAAGAAGATTCCTTCAACTGCAGCAAATGCTACTAT 114477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904809211961400