Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vipera_20berus_20berus_20[genbank_20GCA_5F000800605.1_202014-12-10] 28,883 sequences; 1,532,390,814 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq25442 105 4e-18 >seq25442 Length=71287 Score = 105 bits (116), Expect = 4e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||| ||||| ||||| || || |||| |||| ||||| Sbjct 26949 AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCCAGC 26890 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 || || || || |||||||| | |||||||| | || | || ||||| || | || Sbjct 26889 TGTTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATC 26830 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || ||| ||| || || | ||| ||||| || || Sbjct 26829 TTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCTAGGGTGATGGTTTTCCCA 26770 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| |||||||||||||| Sbjct 26769 GTCAAGGTCTTCACAAAGATCTGCAT 26744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325578152368577